2025
Jiang, Xiao; Gang, Grace; Stayman, J. Webster
Joint Estimation of Anatomy and Implants using a Mixed Prior Model Conference Forthcoming
SPIE Medical Imaging, Forthcoming.
BibTeX | Tags: CBCT, Machine Learning/Deep Learning, Metal Artifacts, Regularization Design
@conference{Jiang2025,
title = {Joint Estimation of Anatomy and Implants using a Mixed Prior Model},
author = {Xiao Jiang and Grace Gang and J. Webster Stayman},
year = {2025},
date = {2025-02-20},
booktitle = {SPIE Medical Imaging},
keywords = {CBCT, Machine Learning/Deep Learning, Metal Artifacts, Regularization Design},
pubstate = {forthcoming},
tppubtype = {conference}
}
Lorenzon, Altea; Jiang, Xiao; Gang, Grace; Stayman, J. Webster
Joint Reconstruction and Scatter Estimation in Cone-beam CT using Diffusion Posterior Sampling Conference Forthcoming
SPIE Medical Imaging, Forthcoming.
BibTeX | Tags: Artifact Correction, CBCT, Machine Learning/Deep Learning, Scatter Estimation
@conference{Lorenzon2025,
title = {Joint Reconstruction and Scatter Estimation in Cone-beam CT using Diffusion Posterior Sampling},
author = {Altea Lorenzon and Xiao Jiang and Grace Gang and J. Webster Stayman},
year = {2025},
date = {2025-02-19},
urldate = {2025-02-19},
booktitle = {SPIE Medical Imaging},
keywords = {Artifact Correction, CBCT, Machine Learning/Deep Learning, Scatter Estimation},
pubstate = {forthcoming},
tppubtype = {conference}
}
2023
Reynolds, Tess; Ma, Yiqun; Wang, Tianyu; Mei, Kai; Noël, Peter; Gang, Grace; Stayman, J. Webster
Revealing pelvic structures in the presence of metal hip prostheses via non-circular CBCT orbits Conference
Proc SPIE Medical Imaging, vol. 12466, SPIE, 2023.
Links | BibTeX | Tags: CBCT, Customized Acquisition, Metal Artifacts
@conference{Reynolds2023b,
title = {Revealing pelvic structures in the presence of metal hip prostheses via non-circular CBCT orbits},
author = {Tess Reynolds and Yiqun Ma and Tianyu Wang and Kai Mei and Peter Noël and Grace Gang and J. Webster Stayman },
url = {https://www.spiedigitallibrary.org/conference-proceedings-of-spie/12466/124660Y/Revealing-pelvic-structures-in-the-presence-of-metal-hip-prostheses/10.1117/12.2652980.full
},
doi = {10.1117/12.2652980},
year = {2023},
date = {2023-04-03},
booktitle = {Proc SPIE Medical Imaging},
volume = {12466},
pages = {228-233},
publisher = {SPIE},
keywords = {CBCT, Customized Acquisition, Metal Artifacts},
pubstate = {published},
tppubtype = {conference}
}
Reynolds, Tess; Hatamikia, Sepideh; Ma, Yiqun; Dillon, Owen; Gang, Grace; Stayman, J. Webster; O'Brien, Ricky T
Extended longitudinal and lateral 3D imaging with a continuous dual‐isocenter CBCT scan Journal Article
In: Medical Physics, vol. 50, iss. 4, pp. 2372-2379, 2023.
Links | BibTeX | Tags: CBCT, Customized Acquisition, Spine
@article{Reynolds2023,
title = {Extended longitudinal and lateral 3D imaging with a continuous dual‐isocenter CBCT scan},
author = {Tess Reynolds and Sepideh Hatamikia and Yiqun Ma and Owen Dillon and Grace Gang and J. Webster Stayman and Ricky T O'Brien},
url = {https://aapm.onlinelibrary.wiley.com/doi/full/10.1002/mp.16234
https://pubmed.ncbi.nlm.nih.gov/36681083/},
doi = {10.1002/mp.16234},
year = {2023},
date = {2023-04-01},
journal = {Medical Physics},
volume = {50},
issue = {4},
pages = {2372-2379},
keywords = {CBCT, Customized Acquisition, Spine},
pubstate = {published},
tppubtype = {article}
}
2022
Reynolds, Tess; Ma, Yiqun; Kanawati, Andrew J; Constantinidis, Alex; Williams, Zoe; Gang, Grace; Dillon, Owen; Russ, Tom; Wang, Wenying; Ehtiati, Tina; Weiss, Clifford; Theodore, Nick; Siewerdsen, Jeffrey H.; Stayman, J. Webster; O'Brien, Ricky T
Extended Intraoperative Longitudinal 3-Dimensional Cone Beam Computed Tomography Imaging With a Continuous Multi-Turn Reverse Helical Scan Journal Article
In: Investigative Radiology, vol. 57, iss. 11, 2022.
Links | BibTeX | Tags: CBCT, Customized Acquisition, Spine
@article{Reynolds2022,
title = {Extended Intraoperative Longitudinal 3-Dimensional Cone Beam Computed Tomography Imaging With a Continuous Multi-Turn Reverse Helical Scan},
author = {Tess Reynolds and Yiqun Ma and Andrew J Kanawati and Alex Constantinidis and Zoe Williams and Grace Gang and Owen Dillon and Tom Russ and Wenying Wang and Tina Ehtiati and Clifford Weiss and Nick Theodore and Jeffrey H. Siewerdsen and J. Webster Stayman and Ricky T O'Brien},
url = {https://pubmed.ncbi.nlm.nih.gov/35510875/, https://journals.lww.com/investigativeradiology/Fulltext/2022/11000/Extended_Intraoperative_Longitudinal_3_Dimensional.7.aspx},
doi = {10.1097/RLI.0000000000000885 },
year = {2022},
date = {2022-05-03},
journal = {Investigative Radiology},
volume = {57},
issue = {11},
keywords = {CBCT, Customized Acquisition, Spine},
pubstate = {published},
tppubtype = {article}
}
Russ, Tom; Ma, Yiqun; Golla, Alena-Kathrin; Bauer, Dominik F; Reynolds, Tess; Toennes, Christian; Hatamikia, Sepideh; Schad, Lothar R.; Zöllner, Frank G; Gang, Grace; Wang, Wenying; Stayman, J. Webster
Fast CBCT reconstruction using convolutional neural networks for arbitrary robotic C-arm orbits Proceedings Article
In: SPIE Medical Imaging, 2022.
Links | BibTeX | Tags: CBCT, Customized Acquisition, Fast Algorithms, Machine Learning/Deep Learning
@inproceedings{Russ2022,
title = {Fast CBCT reconstruction using convolutional neural networks for arbitrary robotic C-arm orbits},
author = {Tom Russ and Yiqun Ma and Alena-Kathrin Golla and Dominik F Bauer and Tess Reynolds and Christian Toennes and Sepideh Hatamikia and Lothar R. Schad and Frank G Zöllner and Grace Gang and Wenying Wang and J. Webster Stayman },
url = {https://pubmed.ncbi.nlm.nih.gov/35601023/, https://www.spiedigitallibrary.org/conference-proceedings-of-spie/12031/120311I/Fast-CBCT-reconstruction-using-convolutional-neural-networks-for-arbitrary-robotic/10.1117/12.2612935.full},
doi = {10.1117/12.2612935 },
year = {2022},
date = {2022-04-04},
urldate = {2022-04-04},
booktitle = {SPIE Medical Imaging},
volume = {12031},
keywords = {CBCT, Customized Acquisition, Fast Algorithms, Machine Learning/Deep Learning},
pubstate = {published},
tppubtype = {inproceedings}
}
Ma, Yiqun; Gang, Grace; Ehtiati, Tina; Reynolds, Tess; Russ, Tom; Wang, Wenying; Weiss, Clifford; Theodore, Nick; Hong, Kelvin; Siewerdsen, Jeffrey H.; Stayman, J. Webster
Non-circular CBCT orbit design and realization on a clinical robotic C-arm for metal artifact reduction Proceedings Article
In: SPIE Medical Imaging, 2022.
Links | BibTeX | Tags: CBCT, Customized Acquisition, Metal Artifacts, Task-Driven Imaging
@inproceedings{Ma2022,
title = {Non-circular CBCT orbit design and realization on a clinical robotic C-arm for metal artifact reduction},
author = {Yiqun Ma and Grace Gang and Tina Ehtiati and Tess Reynolds and Tom Russ and Wenying Wang and Clifford Weiss and Nick Theodore and Kelvin Hong and Jeffrey H. Siewerdsen and J. Webster Stayman },
url = {https://pubmed.ncbi.nlm.nih.gov/35599746/, https://www.spiedigitallibrary.org/conference-proceedings-of-spie/12034/120340A/Non-circular-CBCT-orbit-design-and-realization-on-a-clinical/10.1117/12.2612448.full},
doi = { 10.1117/12.2612448 },
year = {2022},
date = {2022-04-04},
booktitle = {SPIE Medical Imaging},
volume = {12034},
keywords = {CBCT, Customized Acquisition, Metal Artifacts, Task-Driven Imaging},
pubstate = {published},
tppubtype = {inproceedings}
}
2021
Fahrig, Rebecca; Jaffray, David; Suchopoulos, Ioannis; Stayman, J. Webster
Flat-panel Conebeam CT in the Clinic: History and Current State Journal Article
In: Journal of Medical Imaging, vol. 8, iss. 5, pp. 052115, 2021.
@article{Fahrig2021,
title = {Flat-panel Conebeam CT in the Clinic: History and Current State},
author = {Rebecca Fahrig and David Jaffray and Ioannis Suchopoulos and J. Webster Stayman},
url = {https://www.spiedigitallibrary.org/journals/journal-of-medical-imaging/volume-8/issue-05/052115/Flat-panel-conebeam-CT-in-the-clinic--history-and/10.1117/1.JMI.8.5.052115.full#_=_},
doi = {10.1117/1.JMI.8.5.052115},
year = {2021},
date = {2021-10-01},
journal = {Journal of Medical Imaging},
volume = {8},
issue = {5},
pages = {052115},
keywords = {CBCT},
pubstate = {published},
tppubtype = {article}
}
Russ, Tom; Wang, Wenying; Golla, Alena-Kathrin; Bauer, Dominik F; Tivnan, Matt; Toennes, Christian; Ma, Yiqun; Reynolds, Tess; Hatamikia, Sepideh; Schad, Lothar R.; Zöllner, Frank G; Gang, Grace; Stayman, J. Webster
Fast reconstruction of non-circular CBCT orbits using CNNs Proceedings Article
In: 16th International Meeting on Fully 3D Image Reconstruction in Radiology and Nuclear Medicine, 2021.
Links | BibTeX | Tags: CBCT, Customized Acquisition, Machine Learning/Deep Learning
@inproceedings{Russ2021,
title = {Fast reconstruction of non-circular CBCT orbits using CNNs},
author = {Tom Russ and Wenying Wang and Alena-Kathrin Golla and Dominik F Bauer and Matt Tivnan and Christian Toennes and Yiqun Ma and Tess Reynolds and Sepideh Hatamikia and Lothar R. Schad and Frank G Zöllner and Grace Gang and J. Webster Stayman },
url = {https://www.researchgate.net/profile/Sepideh-Hatamikia/publication/355338721_Fast_Reconstruction_of_non-circular_CBCT_orbits_using_CNNs/links/61758df33c987366c3ddea74/Fast-Reconstruction-of-non-circular-CBCT-orbits-using-CNNs.pdf},
year = {2021},
date = {2021-07-19},
urldate = {2021-07-19},
booktitle = {16th International Meeting on Fully 3D Image Reconstruction in Radiology and Nuclear Medicine},
volume = {16},
keywords = {CBCT, Customized Acquisition, Machine Learning/Deep Learning},
pubstate = {published},
tppubtype = {inproceedings}
}
Capostagno, Sarah; Sisniega, Alejandro; Stayman, J. Webster; Ehtiati, Tina; Weiss, Clifford; Siewerdsen, Jeffrey H.
Deformable motion compensation for interventional cone-beam CT Journal Article
In: Physics in Medicine and Biology, vol. 66, no. 5, pp. 055010, 2021.
Links | BibTeX | Tags: CBCT, Image Guided Surgery, Motion Compensation
@article{Capostagno2021,
title = {Deformable motion compensation for interventional cone-beam CT },
author = {Sarah Capostagno and Alejandro Sisniega and J. Webster Stayman and Tina Ehtiati and Clifford Weiss and Jeffrey H. Siewerdsen},
url = {https://pubmed.ncbi.nlm.nih.gov/33594993/},
doi = {10.1088/1361-6560/abb16e },
year = {2021},
date = {2021-02-17},
journal = {Physics in Medicine and Biology},
volume = {66},
number = {5},
pages = {055010},
keywords = {CBCT, Image Guided Surgery, Motion Compensation},
pubstate = {published},
tppubtype = {article}
}
Sisniega, Alejandro; Huang, Heyuan; Zbijewski, Wojciech; Stayman, J. Webster; Weiss, Clifford; Ehtiati, Tina; Siewerdsen, Jeffrey H.
Deformable image-based motion compensation for interventional cone-beam CT with learned autofocus metrics Proceedings Article
In: SPIE Medical Imaging, pp. 115950W, International Society for Optics and Photonics, 2021.
Links | BibTeX | Tags: CBCT, Machine Learning/Deep Learning, Motion Compensation
@inproceedings{Sisniega2021,
title = {Deformable image-based motion compensation for interventional cone-beam CT with learned autofocus metrics},
author = {Alejandro Sisniega and Heyuan Huang and Wojciech Zbijewski and J. Webster Stayman and Clifford Weiss and Tina Ehtiati and Jeffrey H. Siewerdsen},
url = {https://www.spiedigitallibrary.org/conference-proceedings-of-spie/11595/115950W/Deformable-image-based-motion-compensation-for-interventional-cone-beam-CT/10.1117/12.2582140.full},
doi = {10.1117/12.2582140},
year = {2021},
date = {2021-02-15},
booktitle = {SPIE Medical Imaging},
volume = {11595},
pages = {115950W},
publisher = {International Society for Optics and Photonics},
keywords = {CBCT, Machine Learning/Deep Learning, Motion Compensation},
pubstate = {published},
tppubtype = {inproceedings}
}
Zhao, Chumin; Liu, Stephen; Wang, Wenying; Herbst, Magdalena; Weber, Thomas; Vogt, Sebastian; Ritschl, Ludwig; Kappler, Steffen; Stayman, J. Webster; Siewerdsen, Jeffrey H.; Zbijewski, Wojciech
Effects of x-ray scatter in quantitative dual-energy imaging using dual-layer flat panel detectors Proceedings Article
In: SPIE Medical Imaging, pp. 115952A, International Society for Optics and Photonics, 2021.
Links | BibTeX | Tags: CBCT, High-Fidelity Modeling, Scatter Estimation, Spectral X-ray/CT
@inproceedings{Zhao2021,
title = {Effects of x-ray scatter in quantitative dual-energy imaging using dual-layer flat panel detectors},
author = {Chumin Zhao and Stephen Liu and Wenying Wang and Magdalena Herbst and Thomas Weber and Sebastian Vogt and Ludwig Ritschl and Steffen Kappler and J. Webster Stayman and Jeffrey H. Siewerdsen and Wojciech Zbijewski},
url = {https://www.spiedigitallibrary.org/conference-proceedings-of-spie/11595/115952A/Effects-of-x-ray-scatter-in-quantitative-dual-energy-imaging/10.1117/12.2581822.full},
doi = {10.1117/12.2581822},
year = {2021},
date = {2021-02-15},
booktitle = {SPIE Medical Imaging},
volume = {11595},
pages = {115952A},
publisher = {International Society for Optics and Photonics},
keywords = {CBCT, High-Fidelity Modeling, Scatter Estimation, Spectral X-ray/CT},
pubstate = {published},
tppubtype = {inproceedings}
}
2020
Ma, Yiqun; Wang, Wenying; Tivnan, Matt; Li, Junyuan; Lu, Minghui; Zhang, Jin; Star-Lack, Josh; Colbeth, Richard; Zbijewski, Wojciech; Stayman, J. Webster
High-Resolution Model-based Material Decomposition for Multi-Layer Flat-Panel Detectors Proceedings Article
In: International Conference on Image Formation in X-Ray Computed Tomography, 2020.
Links | BibTeX | Tags: CBCT, High-Fidelity Modeling, High-Resolution CT, MBIR, Spectral X-ray/CT
@inproceedings{Ma2020,
title = {High-Resolution Model-based Material Decomposition for Multi-Layer Flat-Panel Detectors},
author = {Yiqun Ma and Wenying Wang and Matt Tivnan and Junyuan Li and Minghui Lu and Jin Zhang and Josh Star-Lack and Richard Colbeth and Wojciech Zbijewski and J. Webster Stayman},
url = {https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7643886/},
year = {2020},
date = {2020-08-01},
booktitle = {International Conference on Image Formation in X-Ray Computed Tomography},
keywords = {CBCT, High-Fidelity Modeling, High-Resolution CT, MBIR, Spectral X-ray/CT},
pubstate = {published},
tppubtype = {inproceedings}
}
Gang, Grace; Russ, Tom; Ma, Yiqun; Toennes, Christian; Siewerdsen, Jeffrey H.; Schad, Lothar R.; Stayman, J. Webster
Metal-Tolerant Noncircular Orbit Design and Implementation on Robotic C-Arm Systems Proceedings Article
In: International Conference on Image Formation in X-Ray Computed Tomography, 2020.
Links | BibTeX | Tags: Analysis, CBCT, Customized Acquisition, Image Guided Surgery, MBIR, Metal Artifacts, Task-Driven Imaging
@inproceedings{Gang2020b,
title = {Metal-Tolerant Noncircular Orbit Design and Implementation on Robotic C-Arm Systems},
author = {Grace Gang and Tom Russ and Yiqun Ma and Christian Toennes and Jeffrey H. Siewerdsen and Lothar R. Schad and J. Webster Stayman},
url = {https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7643882/},
year = {2020},
date = {2020-08-01},
booktitle = {International Conference on Image Formation in X-Ray Computed Tomography},
keywords = {Analysis, CBCT, Customized Acquisition, Image Guided Surgery, MBIR, Metal Artifacts, Task-Driven Imaging},
pubstate = {published},
tppubtype = {inproceedings}
}
Wu, Pengwei; Sisniega, Alejandro; Stayman, J. Webster; Zbijewski, Wojciech; Foos, David H.; Wang, Xiaohui; Khanna, Nishanth; Aygun, Nafi; Stevens, R.; Siewerdsen, Jeffrey H.
Cone-beam CT for imaging of the head/brain: Development and assessment of scanner prototype and reconstruction algorithms Journal Article
In: Medical Physics, vol. 47, no. 6, pp. 2392-2407, 2020.
Links | BibTeX | Tags: CBCT, Head/Neck, MBIR, System Assessment, System Design
@article{Wu2020,
title = {Cone-beam CT for imaging of the head/brain: Development and assessment of scanner prototype and reconstruction algorithms },
author = {Pengwei Wu and Alejandro Sisniega and J. Webster Stayman and Wojciech Zbijewski and David H. Foos and Xiaohui Wang and Nishanth Khanna and Nafi Aygun and R. Stevens and Jeffrey H. Siewerdsen},
url = {https://pubmed.ncbi.nlm.nih.gov/32145076/},
doi = {10.1002/mp.14124},
year = {2020},
date = {2020-06-01},
journal = {Medical Physics},
volume = {47},
number = {6},
pages = {2392-2407},
keywords = {CBCT, Head/Neck, MBIR, System Assessment, System Design},
pubstate = {published},
tppubtype = {article}
}
Wang, Wenying; Tivnan, Matt; Gang, Grace; Ma, Yiqun; Lu, Minghui; Star-Lack, Josh; Colbeth, Richard; Zbijewski, Wojciech; Stayman, J. Webster
Model-based Material Decomposition with System Blur Modeling Honorable Mention Proceedings Article
In: SPIE Medical Imaging, pp. 113123Q, International Society for Optics and Photonics, 2020, (1st Place Poster Award ).
Links | BibTeX | Tags: -Awards-, CBCT, High-Resolution CT, MBIR, Spectral X-ray/CT
@inproceedings{Wang2020b,
title = {Model-based Material Decomposition with System Blur Modeling},
author = {Wenying Wang and Matt Tivnan and Grace Gang and Yiqun Ma and Minghui Lu and Josh Star-Lack and Richard Colbeth and Wojciech Zbijewski and J. Webster Stayman},
url = {https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7641016/},
doi = {10.1117/12.2549549},
year = {2020},
date = {2020-03-16},
urldate = {2020-03-16},
booktitle = {SPIE Medical Imaging},
volume = {11312},
pages = {113123Q},
publisher = {International Society for Optics and Photonics},
note = {1st Place Poster Award },
keywords = {-Awards-, CBCT, High-Resolution CT, MBIR, Spectral X-ray/CT},
pubstate = {published},
tppubtype = {inproceedings}
}
Capostagno, Sarah; Sisniega, Alejandro; Stayman, J. Webster; Ehtiati, Tina; Weiss, Clifford; Siewerdsen, Jeffrey H.
Image-based deformable motion compensation in cone-beam CT: translation to clinical studies in interventional body radiology Proceedings Article
In: SPIE Medical Imaging, pp. 113150B, International Society for Optics and Photonics, 2020.
Links | BibTeX | Tags: CBCT, Image Guided Surgery, Motion Compensation
@inproceedings{Capostagno2020,
title = {Image-based deformable motion compensation in cone-beam CT: translation to clinical studies in interventional body radiology},
author = {Sarah Capostagno and Alejandro Sisniega and J. Webster Stayman and Tina Ehtiati and Clifford Weiss and Jeffrey H. Siewerdsen},
url = {https://www.spiedigitallibrary.org/conference-proceedings-of-spie/11315/0000/Image-based-deformable-motion-compensation-in-cone-beam-CT/10.1117/12.2549998.full},
doi = {10.1117/12.2549998},
year = {2020},
date = {2020-03-16},
booktitle = {SPIE Medical Imaging},
volume = {11315},
pages = {113150B},
publisher = {International Society for Optics and Photonics},
keywords = {CBCT, Image Guided Surgery, Motion Compensation},
pubstate = {published},
tppubtype = {inproceedings}
}
Sisniega, Alejandro; Capostagno, Sarah; Zbijewski, Wojciech; Stayman, J. Webster; Ehtiati, Tina; Siewerdsen, Jeffrey H.
Estimation of local deformable motion in image-based motion compensation for interventional cone-beam CT Proceedings Article
In: SPIE Medical Imaging, pp. 113121M, International Society for Optics and Photonics, 2020.
Links | BibTeX | Tags: CBCT, Image Guided Surgery, Image Registration, Machine Learning/Deep Learning
@inproceedings{Sisniega2020,
title = {Estimation of local deformable motion in image-based motion compensation for interventional cone-beam CT},
author = {Alejandro Sisniega and Sarah Capostagno and Wojciech Zbijewski and J. Webster Stayman and Tina Ehtiati and Jeffrey H. Siewerdsen},
url = {https://www.spiedigitallibrary.org/conference-proceedings-of-spie/11312/113121M/Estimation-of-local-deformable-motion-in-image-based-motion-compensation/10.1117/12.2549753.full},
doi = {10.1117/12.2549753},
year = {2020},
date = {2020-03-16},
booktitle = {SPIE Medical Imaging},
volume = {11312},
pages = {113121M},
publisher = {International Society for Optics and Photonics},
keywords = {CBCT, Image Guided Surgery, Image Registration, Machine Learning/Deep Learning},
pubstate = {published},
tppubtype = {inproceedings}
}
Liu, Stephen; Cao, Qian; Osgood, Greg M.; Siewerdsen, Jeffrey H.; Stayman, J. Webster; Zbijewski, Wojciech
Quantitative assessment of weight-bearing fracture biomechanics using extremity cone-beam CT Proceedings Article
In: SPIE Medical Imaging, pp. 113170I, International Society for Optics and Photonics, 2020.
Links | BibTeX | Tags: CBCT, Extremities, Known Components
@inproceedings{Liu2020b,
title = {Quantitative assessment of weight-bearing fracture biomechanics using extremity cone-beam CT},
author = {Stephen Liu and Qian Cao and Greg M. Osgood and Jeffrey H. Siewerdsen and J. Webster Stayman and Wojciech Zbijewski},
url = {https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7891844/},
doi = {10.1117/12.2549768},
year = {2020},
date = {2020-03-02},
booktitle = {SPIE Medical Imaging},
volume = {11317},
pages = {113170I},
publisher = {International Society for Optics and Photonics},
keywords = {CBCT, Extremities, Known Components},
pubstate = {published},
tppubtype = {inproceedings}
}
2019
Zhang, Xiaoxuan; Uneri, Ali; Stayman, J. Webster; Zygourakis, C. C.; Lo, S. L.; Theodore, Nick; Siewerdsen, Jeffrey H.
Known-component 3D image reconstruction for improved intraoperative imaging in spine surgery: A clinical pilot study Journal Article
In: Medical Physics, vol. 46, no. 8, pp. 3483-95, 2019.
Abstract | Links | BibTeX | Tags: CBCT, Image Guided Surgery, Known Components, MBIR, Metal Artifacts, Spine
@article{Zhang2019b,
title = {Known-component 3D image reconstruction for improved intraoperative imaging in spine surgery: A clinical pilot study},
author = {Xiaoxuan Zhang and Ali Uneri and J. Webster Stayman and C. C. Zygourakis and S. L. Lo and Nick Theodore and Jeffrey H. Siewerdsen},
url = {https://pubmed.ncbi.nlm.nih.gov/31180586/},
doi = {10.1002/mp.13652},
year = {2019},
date = {2019-08-01},
journal = {Medical Physics},
volume = {46},
number = {8},
pages = {3483-95},
abstract = {Purpose: Intraoperative imaging plays an increased role in support of surgical guidance and quality assurance for interventional approaches. However, image quality sufficient to detect complications and provide quantitative assessment of the surgical product is often confounded by image noise and artifacts. In this work, we translated a three-dimensional model-based image reconstruction (referred to as "Known-Component Reconstruction," KC-Recon) for the first time to clinical studies with the aim of resolving both limitations.
Methods: KC-Recon builds upon a penalized weighted least-squares (PWLS) method by incorporating models of surgical instrumentation ("known components") within a joint image registration-reconstruction process to improve image quality. Under IRB approval, a clinical pilot study was conducted with 17 spine surgery patients imaged under informed consent using the O-arm cone-beam CT system (Medtronic, Littleton MA) before and after spinal instrumentation. Volumetric images were generated for each patient using KC-Recon in comparison to conventional filtered backprojection (FBP). Imaging performance prior to instrumentation ("preinstrumentation") was evaluated in terms of soft-tissue contrast-to-noise ratio (CNR) and spatial resolution. The quality of images obtained after the instrumentation ("postinstrumentation") was assessed by quantifying the magnitude of metal artifacts (blooming and streaks) arising from pedicle screws. The potential low-dose advantages of the algorithm were tested by simulating low-dose data (down to one-tenth of the dose of standard protocols) from images acquired at normal dose.
Results: Preinstrumentation images (at normal clinical dose and matched resolution) exhibited an average 24.0% increase in soft-tissue CNR with KC-Recon compared to FBP (N = 16, P = 0.02), improving visualization of paraspinal muscles, major vessels, and other soft-tissues about the spine and abdomen. For a total of 72 screws in postinstrumentation images, KC-Recon yielded a significant reduction in metal artifacts: 66.3% reduction in overestimation of screw shaft width due to blooming (P < 0.0001) and reduction in streaks at the screw tip (65.8% increase in attenuation accuracy, P < 0.0001), enabling clearer depiction of the screw within the pedicle and vertebral body for an assessment of breach. Depending on the imaging task, dose reduction up to an order of magnitude appeared feasible while maintaining soft-tissue visibility and metal artifact reduction.
Conclusions: KC-Recon offers a promising means to improve visualization in the presence of surgical instrumentation and reduce patient dose in image-guided procedures. The improved soft-tissue visibility could facilitate the use of cone-beam CT to soft-tissue surgeries, and the ability to precisely quantify and visualize instrument placement could provide a valuable check against complications in the operating room (cf., postoperative CT).
Keywords: cone-beam CT; image-guided procedures; intraoperative imaging; model-based image reconstruction; patient safety.},
keywords = {CBCT, Image Guided Surgery, Known Components, MBIR, Metal Artifacts, Spine},
pubstate = {published},
tppubtype = {article}
}
Methods: KC-Recon builds upon a penalized weighted least-squares (PWLS) method by incorporating models of surgical instrumentation ("known components") within a joint image registration-reconstruction process to improve image quality. Under IRB approval, a clinical pilot study was conducted with 17 spine surgery patients imaged under informed consent using the O-arm cone-beam CT system (Medtronic, Littleton MA) before and after spinal instrumentation. Volumetric images were generated for each patient using KC-Recon in comparison to conventional filtered backprojection (FBP). Imaging performance prior to instrumentation ("preinstrumentation") was evaluated in terms of soft-tissue contrast-to-noise ratio (CNR) and spatial resolution. The quality of images obtained after the instrumentation ("postinstrumentation") was assessed by quantifying the magnitude of metal artifacts (blooming and streaks) arising from pedicle screws. The potential low-dose advantages of the algorithm were tested by simulating low-dose data (down to one-tenth of the dose of standard protocols) from images acquired at normal dose.
Results: Preinstrumentation images (at normal clinical dose and matched resolution) exhibited an average 24.0% increase in soft-tissue CNR with KC-Recon compared to FBP (N = 16, P = 0.02), improving visualization of paraspinal muscles, major vessels, and other soft-tissues about the spine and abdomen. For a total of 72 screws in postinstrumentation images, KC-Recon yielded a significant reduction in metal artifacts: 66.3% reduction in overestimation of screw shaft width due to blooming (P < 0.0001) and reduction in streaks at the screw tip (65.8% increase in attenuation accuracy, P < 0.0001), enabling clearer depiction of the screw within the pedicle and vertebral body for an assessment of breach. Depending on the imaging task, dose reduction up to an order of magnitude appeared feasible while maintaining soft-tissue visibility and metal artifact reduction.
Conclusions: KC-Recon offers a promising means to improve visualization in the presence of surgical instrumentation and reduce patient dose in image-guided procedures. The improved soft-tissue visibility could facilitate the use of cone-beam CT to soft-tissue surgeries, and the ability to precisely quantify and visualize instrument placement could provide a valuable check against complications in the operating room (cf., postoperative CT).
Keywords: cone-beam CT; image-guided procedures; intraoperative imaging; model-based image reconstruction; patient safety.
Wu, Pengwei; Sisniega, Alejandro; Stayman, J. Webster; Zbijewski, Wojciech; Foos, David H.; Wang, Xiaohui; Aygun, Nafi; Stevens, R.; Siewerdsen, Jeffrey H.
Clinical study of soft-tissue contrast resolution in cone-beam CT of the head using multi-resolution PWLS with multi-motion correction and an electronic noise model Proceedings Article
In: 15th International Meeting on Fully Three-Dimensional Image Reconstruction, Proc. SPIE , 2019.
Links | BibTeX | Tags: CBCT, Head/Neck, High-Fidelity Modeling, MBIR
@inproceedings{Wu2019b,
title = {Clinical study of soft-tissue contrast resolution in cone-beam CT of the head using multi-resolution PWLS with multi-motion correction and an electronic noise model},
author = {Pengwei Wu and Alejandro Sisniega and J. Webster Stayman and Wojciech Zbijewski and David H. Foos and Xiaohui Wang and Nafi Aygun and R. Stevens and Jeffrey H. Siewerdsen },
url = {https://www.spiedigitallibrary.org/conference-proceedings-of-spie/11072/2534887/Clinical-study-of-soft-tissue-contrast-resolution-in-cone-beam/10.1117/12.2534887.short},
doi = {10.1117/12.2534887},
year = {2019},
date = {2019-06-02},
booktitle = {15th International Meeting on Fully Three-Dimensional Image Reconstruction, Proc. SPIE },
volume = {11072},
number = {110720B},
keywords = {CBCT, Head/Neck, High-Fidelity Modeling, MBIR},
pubstate = {published},
tppubtype = {inproceedings}
}
Stayman, J. Webster; Capostagno, Sarah; Gang, Grace; Siewerdsen, Jeffrey H.
Task-driven source–detector trajectories in cone-beam computed tomography: I. Theory and methods Journal Article
In: Journal of Medical Imaging, vol. 6, no. 2, pp. 025002, 2019.
Links | BibTeX | Tags: CBCT, Customized Acquisition, Image Guided Surgery, MBIR, Task-Driven Imaging
@article{Stayman2019,
title = {Task-driven source–detector trajectories in cone-beam computed tomography: I. Theory and methods},
author = {J. Webster Stayman and Sarah Capostagno and Grace Gang and Jeffrey H. Siewerdsen },
url = {https://www.spiedigitallibrary.org/journals/Journal-of-Medical-Imaging/volume-6/issue-2/025002/Task-driven-sourcedetector-trajectories-in-cone-beam-computed-tomography/10.1117/1.JMI.6.2.025002.full},
doi = {10.1117/1.JMI.6.2.025002},
year = {2019},
date = {2019-05-02},
journal = {Journal of Medical Imaging},
volume = {6},
number = {2},
pages = {025002},
keywords = {CBCT, Customized Acquisition, Image Guided Surgery, MBIR, Task-Driven Imaging},
pubstate = {published},
tppubtype = {article}
}
Capostagno, Sarah; Stayman, J. Webster; Jacobson, Matthew W.; Ehtiati, Tina; Weiss, Clifford; Siewerdsen, Jeffrey H.
Task-driven source–detector trajectories in cone-beam computed tomography: II. Application to neuroradiology Journal Article
In: Journal of Medical Imaging, vol. 6, no. 2, pp. 025004, 2019.
Links | BibTeX | Tags: CBCT, Customized Acquisition, Head/Neck, Image Guided Surgery, Task-Driven Imaging
@article{Capostagno2019,
title = {Task-driven source–detector trajectories in cone-beam computed tomography: II. Application to neuroradiology},
author = {Sarah Capostagno and J. Webster Stayman and Matthew W. Jacobson and Tina Ehtiati and Clifford Weiss and Jeffrey H. Siewerdsen },
url = {https://www.spiedigitallibrary.org/journals/Journal-of-Medical-Imaging/volume-6/issue-2/025004/Task-driven-sourcedetector-trajectories-in-cone-beam-computed-tomography/10.1117/1.JMI.6.2.025004.full},
doi = {10.1117/1.JMI.6.2.025004},
year = {2019},
date = {2019-03-09},
journal = {Journal of Medical Imaging},
volume = {6},
number = {2},
pages = {025004},
keywords = {CBCT, Customized Acquisition, Head/Neck, Image Guided Surgery, Task-Driven Imaging},
pubstate = {published},
tppubtype = {article}
}
Zhang, Xiaoxuan; Uneri, Ali; Stayman, J. Webster; Zygourakis, C. C.; Theodore, Nick; Siewerdsen, Jeffrey H.
Improved intraoperative imaging in spine surgery: clinical translation of known-component 3D image reconstruction on the O-arm system Proceedings Article
In: Proc. SPIE Medical Imaging, pp. 1095103-1-8, 2019.
Links | BibTeX | Tags: CBCT, Image Guided Surgery, Known Components, MBIR, Spine
@inproceedings{Zhang2019,
title = {Improved intraoperative imaging in spine surgery: clinical translation of known-component 3D image reconstruction on the O-arm system},
author = {Xiaoxuan Zhang and Ali Uneri and J. Webster Stayman and C. C. Zygourakis and Nick Theodore and Jeffrey H. Siewerdsen},
url = {https://www.spiedigitallibrary.org/conference-proceedings-of-spie/10951/1095103/Improved-intraoperative-imaging-in-spine-surgery--clinical-translation-of/10.1117/12.2513777.full?SSO=1},
doi = {10.1117/12.2513777},
year = {2019},
date = {2019-03-08},
booktitle = {Proc. SPIE Medical Imaging},
volume = {10951},
pages = {1095103-1-8},
keywords = {CBCT, Image Guided Surgery, Known Components, MBIR, Spine},
pubstate = {published},
tppubtype = {inproceedings}
}
Wu, Pengwei; Sisniega, Alejandro; Stayman, J. Webster; Zbijewski, Wojciech; Foos, David H.; Wang, Xiaohui; Aygun, Nafi; Stevens, R.; Siewerdsen, Jeffrey H.
Cone-beam CT statistical reconstruction with a model for fluence modulation and electronic readout noise Proceedings Article
In: Proc. SPIE Medical Imaging, pp. 1094814-1-7, 2019.
Links | BibTeX | Tags: CBCT, High-Fidelity Modeling, MBIR
@inproceedings{Wu2019,
title = {Cone-beam CT statistical reconstruction with a model for fluence modulation and electronic readout noise},
author = {Pengwei Wu and Alejandro Sisniega and J. Webster Stayman and Wojciech Zbijewski and David H. Foos and Xiaohui Wang and Nafi Aygun and R. Stevens and Jeffrey H. Siewerdsen},
url = {https://www.spiedigitallibrary.org/conference-proceedings-of-spie/10948/1094814/Cone-beam-CT-statistical-reconstruction-with-a-model-for-fluence/10.1117/12.2513417.full},
doi = {10.1117/12.2513417},
year = {2019},
date = {2019-03-01},
booktitle = {Proc. SPIE Medical Imaging},
volume = {10948},
pages = {1094814-1-7},
keywords = {CBCT, High-Fidelity Modeling, MBIR},
pubstate = {published},
tppubtype = {inproceedings}
}
Cao, Qian; Sisniega, Alejandro; Stayman, J. Webster; Yorkston, John; Siewerdsen, Jeffrey H.; Zbijewski, Wojciech
Quantitative cone-beam CT of bone mineral density using model-based reconstruction Proceedings Article
In: Proc. SPIE Medical Imaging, pp. 109480Y-1-6, 2019.
Links | BibTeX | Tags: Artifact Correction, Beam Hardening, CBCT, Extremities, MBIR
@inproceedings{Cao2019,
title = {Quantitative cone-beam CT of bone mineral density using model-based reconstruction},
author = {Qian Cao and Alejandro Sisniega and J. Webster Stayman and John Yorkston and Jeffrey H. Siewerdsen and Wojciech Zbijewski },
url = {https://www.spiedigitallibrary.org/conference-proceedings-of-spie/10948/109480Y/Quantitative-cone-beam-CT-of-bone-mineral-density-using-model/10.1117/12.2513216.full},
doi = {10.1117/12.2513216},
year = {2019},
date = {2019-03-01},
booktitle = {Proc. SPIE Medical Imaging},
volume = {10948},
pages = {109480Y-1-6},
keywords = {Artifact Correction, Beam Hardening, CBCT, Extremities, MBIR},
pubstate = {published},
tppubtype = {inproceedings}
}
Wang, Wenying; Gang, Grace; Siewerdsen, Jeffrey H.; Stayman, J. Webster
Predicting image properties in penalized‐likelihood reconstructions of flat‐panel CBCT Journal Article
In: Medical Physics, vol. 46, no. 1, pp. 65-80, 2019.
Links | BibTeX | Tags: Analysis, CBCT, High-Fidelity Modeling, MBIR, Regularization Design
@article{Wang2019,
title = {Predicting image properties in penalized‐likelihood reconstructions of flat‐panel CBCT},
author = {Wenying Wang and Grace Gang and Jeffrey H. Siewerdsen and J. Webster Stayman},
url = {https://aapm.onlinelibrary.wiley.com/doi/full/10.1002/mp.13249},
doi = {10.1002/mp.13249},
year = {2019},
date = {2019-01-01},
journal = {Medical Physics},
volume = {46},
number = {1},
pages = {65-80},
keywords = {Analysis, CBCT, High-Fidelity Modeling, MBIR, Regularization Design},
pubstate = {published},
tppubtype = {article}
}
2018
Wu, Pengwei; Stayman, J. Webster; Sisniega, Alejandro; Zbijewski, Wojciech; Foos, David H.; Wang, Xiaohui; Aygun, Nafi; Stevens, R.; Siewerdsen, Jeffrey H.
Statistical weights for model-based reconstruction in cone-beam CT with electronic noise and dual-gain detector readout Journal Article
In: Physics in Medicine and Biology, vol. 63, no. 24, pp. 245018, 2018.
Links | BibTeX | Tags: CBCT, High-Fidelity Modeling, MBIR
@article{Wu2018c,
title = {Statistical weights for model-based reconstruction in cone-beam CT with electronic noise and dual-gain detector readout},
author = {Pengwei Wu and J. Webster Stayman and Alejandro Sisniega and Wojciech Zbijewski and David H. Foos and Xiaohui Wang and Nafi Aygun and R. Stevens and Jeffrey H. Siewerdsen},
url = {https://iopscience.iop.org/article/10.1088/1361-6560/aaf0b4/meta},
doi = {10.1088/1361-6560/aaf0b4},
year = {2018},
date = {2018-12-14},
journal = {Physics in Medicine and Biology},
volume = {63},
number = {24},
pages = {245018},
keywords = {CBCT, High-Fidelity Modeling, MBIR},
pubstate = {published},
tppubtype = {article}
}
Uneri, Ali; Zhang, Xiaoxuan; Yi, T.; Stayman, J. Webster; Helm, Patrick; Theodore, Nick; Siewerdsen, Jeffrey H.
Image quality and dose characteristics for an O‐arm intraoperative imaging system with model‐based image reconstruction Journal Article
In: Medical Physics, vol. 45, no. 11, pp. 4857-4868, 2018.
Links | BibTeX | Tags: CBCT, MBIR, Spine, System Assessment
@article{Uneri2018c,
title = {Image quality and dose characteristics for an O‐arm intraoperative imaging system with model‐based image reconstruction},
author = {Ali Uneri and Xiaoxuan Zhang and T. Yi and J. Webster Stayman and Patrick Helm and Nick Theodore and Jeffrey H. Siewerdsen},
url = {https://aapm.onlinelibrary.wiley.com/doi/full/10.1002/mp.13167},
doi = {10.1002/mp.13167},
year = {2018},
date = {2018-09-04},
journal = {Medical Physics},
volume = {45},
number = {11},
pages = {4857-4868},
keywords = {CBCT, MBIR, Spine, System Assessment},
pubstate = {published},
tppubtype = {article}
}
2017
Zhang, Hao; Gang, Grace; Lee, Junghoon; Wong, John W.; Stayman, J. Webster
Integration of Prior CT into CBCT Reconstruction for Improved Image Quality via Reconstruction of Difference: First Patient Studies Proceedings Article
In: Flohr, Thomas G.; Lo, Joseph Y.; Schmidt, Taly Gilat (Ed.): SPIE Medical Imaging, pp. 1013211-1–6, 2017.
Links | BibTeX | Tags: CBCT, Image Registration, MBIR, Multimodality, Prior Images
@inproceedings{Zhang2017b,
title = {Integration of Prior CT into CBCT Reconstruction for Improved Image Quality via Reconstruction of Difference: First Patient Studies},
author = {Hao Zhang and Grace Gang and Junghoon Lee and John W. Wong and J. Webster Stayman },
editor = {Thomas G. Flohr and Joseph Y. Lo and Taly Gilat Schmidt},
url = {http://proceedings.spiedigitallibrary.org/proceeding.aspx?doi=10.1117/12.2255513},
doi = {10.1117/12.2255513},
year = {2017},
date = {2017-03-01},
booktitle = {SPIE Medical Imaging},
volume = {1},
pages = {1013211-1--6},
keywords = {CBCT, Image Registration, MBIR, Multimodality, Prior Images},
pubstate = {published},
tppubtype = {inproceedings}
}
2016
Xu, Jennifer; Sisniega, Alejandro; Zbijewski, Wojciech; Dang, Hao; Stayman, J. Webster; Wang, Xiaohui; Foos, David H.; Aygun, Nafi; Koliatsos, Vassilis; Siewerdsen, Jeffrey H.
Evaluation of detector readout gain mode and bowtie filters for cone-beam CT imaging of the head. Journal Article
In: Physics in medicine and biology, vol. 61, no. 16, pp. 5973–92, 2016, ISSN: 1361-6560.
Abstract | Links | BibTeX | Tags: CBCT, Head/Neck, System Assessment, System Design
@article{xu2016evaluation,
title = {Evaluation of detector readout gain mode and bowtie filters for cone-beam CT imaging of the head.},
author = {Jennifer Xu and Alejandro Sisniega and Wojciech Zbijewski and Hao Dang and J. Webster Stayman and Xiaohui Wang and David H. Foos and Nafi Aygun and Vassilis Koliatsos and Jeffrey H. Siewerdsen},
url = {http://www.ncbi.nlm.nih.gov/pubmed/27435162},
doi = {10.1088/0031-9155/61/16/5973},
issn = {1361-6560},
year = {2016},
date = {2016-08-01},
journal = {Physics in medicine and biology},
volume = {61},
number = {16},
pages = {5973--92},
publisher = {IOP Publishing},
abstract = {The effects of detector readout gain mode and bowtie filters on cone-beam CT (CBCT) image quality and dose were characterized for a new CBCT system developed for point-of-care imaging of the head, with potential application to diagnosis of traumatic brain injury, intracranial hemorrhage (ICH), and stroke. A detector performance model was extended to include the effects of detector readout gain on electronic digitization noise. The noise performance for high-gain (HG), low-gain (LG), and dual-gain (DG) detector readout was evaluated, and the benefit associated with HG mode in regions free from detector saturation was quantified. Such benefit could be realized (without detector saturation) either via DG mode or by incorporation of a bowtie filter. Therefore, three bowtie filters were investigated that varied in thickness and curvature. A polyenergetic gain correction method was developed to equalize the detector response between the flood-field and projection data in the presence of a bowtie. The effect of bowtie filters on dose, scatter-to-primary ratio, contrast, and noise was quantified in phantom studies, and results were compared to a high-speed Monte Carlo (MC) simulation to characterize x-ray scatter and dose distributions in the head. Imaging in DG mode improved the contrast-to-noise ratio (CNR) by ~15% compared to LG mode at a dose (D 0, measured at the center of a 16 cm CTDI phantom) of 19 mGy. MC dose calculations agreed with CTDI measurements and showed that bowtie filters reduce peripheral dose by as much as 50% at the same central dose. Bowtie filters were found to increase the CNR per unit square-root dose near the center of the image by ~5-20% depending on bowtie thickness, but reduced CNR in the periphery by ~10-40%. Images acquired at equal CTDIw with and without a bowtie demonstrated a 24% increase in CNR at the center of an anthropomorphic head phantom. Combining a thick bowtie filter with a short arc (180° + fan angle) scan centered on the posterior of the head reduced dose to the eye lens by up to 90%. Acquisition in DG mode (without a bowtie filter) was beneficial to the detection of small, low contrast lesions (e.g. subtle ICH) in CBCT. While bowtie filters were found to reduce dose, mitigate sensor saturation at the periphery in HG mode, and improve CNR at the center of the image, the image quality at the periphery was slightly reduced compared to DG mode, and the use of a bowtie required careful implementation of the polyenergetic flood-field correction to avoid artifacts.},
keywords = {CBCT, Head/Neck, System Assessment, System Design},
pubstate = {published},
tppubtype = {article}
}
Cao, Qian; Brehler, Michael; Sisniega, Alejandro; Marinetto, Eugenio; Zyazin, A; Peters, I; Stayman, J. Webster; Yorkston, John; Siewerdsen, Jeffrey H.; Zbijewski, Wojciech
High-Resolution Cone-Beam CT of the Extremities and Cancellous Bone Architecture with a CMOS Detector Best Paper Presentation
AAPM Annual Meeting: Best-in-Physics Award, 07.06.2016, (AAPM Best-in-Physics Award).
Links | BibTeX | Tags: -Awards-, CBCT, Extremities, High-Resolution CT
@misc{Cao2016b,
title = {High-Resolution Cone-Beam CT of the Extremities and Cancellous Bone Architecture with a CMOS Detector},
author = {Qian Cao and Michael Brehler and Alejandro Sisniega and Eugenio Marinetto and A Zyazin and I Peters and J. Webster Stayman and John Yorkston and Jeffrey H. Siewerdsen and Wojciech Zbijewski},
url = {https://aapm.onlinelibrary.wiley.com/doi/10.1118/1.4957754},
year = {2016},
date = {2016-06-07},
urldate = {2016-06-07},
howpublished = {AAPM Annual Meeting: Best-in-Physics Award},
note = {AAPM Best-in-Physics Award},
keywords = {-Awards-, CBCT, Extremities, High-Resolution CT},
pubstate = {published},
tppubtype = {presentation}
}
Ouadah, Sarah; Stayman, J. Webster; Gang, Grace; Ehtiati, Tina; Siewerdsen, Jeffrey H.
Self-calibration of cone-beam CT geometry using 3D-2D image registration. Journal Article
In: Physics in medicine and biology, vol. 61, no. 7, pp. 2613–32, 2016, ISSN: 1361-6560.
Abstract | Links | BibTeX | Tags: CBCT, Customized Acquisition, Geometric Calibration, Image Registration
@article{Ouadah2016,
title = {Self-calibration of cone-beam CT geometry using 3D-2D image registration.},
author = {Sarah Ouadah and J. Webster Stayman and Grace Gang and Tina Ehtiati and Jeffrey H. Siewerdsen },
url = {http://www.pubmedcentral.nih.gov/articlerender.fcgi?artid=PMC4948745},
doi = {10.1088/0031-9155/61/7/2613},
issn = {1361-6560},
year = {2016},
date = {2016-04-01},
journal = {Physics in medicine and biology},
volume = {61},
number = {7},
pages = {2613--32},
abstract = {Robotic C-arms are capable of complex orbits that can increase field of view, reduce artifacts, improve image quality, and/or reduce dose; however, it can be challenging to obtain accurate, reproducible geometric calibration required for image reconstruction for such complex orbits. This work presents a method for geometric calibration for an arbitrary source-detector orbit by registering 2D projection data to a previously acquired 3D image. It also yields a method by which calibration of simple circular orbits can be improved. The registration uses a normalized gradient information similarity metric and the covariance matrix adaptation-evolution strategy optimizer for robustness against local minima and changes in image content. The resulting transformation provides a 'self-calibration' of system geometry. The algorithm was tested in phantom studies using both a cone-beam CT (CBCT) test-bench and a robotic C-arm (Artis Zeego, Siemens Healthcare) for circular and non-circular orbits. Self-calibration performance was evaluated in terms of the full-width at half-maximum (FWHM) of the point spread function in CBCT reconstructions, the reprojection error (RPE) of steel ball bearings placed on each phantom, and the overall quality and presence of artifacts in CBCT images. In all cases, self-calibration improved the FWHM-e.g. on the CBCT bench},
keywords = {CBCT, Customized Acquisition, Geometric Calibration, Image Registration},
pubstate = {published},
tppubtype = {article}
}
Xu, Jennifer; Sisniega, Alejandro; Zbijewski, Wojciech; Dang, Hao; Stayman, J. Webster; Wang, Xiaohui; Foos, David H.; Aygun, Nafi; Koliatsos, Vassilis; Siewerdsen, Jeffrey H.
Modeling and design of a cone-beam CT head scanner using task-based imaging performance optimization. Journal Article
In: Physics in medicine and biology, vol. 61, no. 8, pp. 3180–207, 2016, ISSN: 1361-6560.
Abstract | Links | BibTeX | Tags: CBCT, Head/Neck, System Assessment, System Design
@article{xu2016modeling,
title = {Modeling and design of a cone-beam CT head scanner using task-based imaging performance optimization.},
author = {Jennifer Xu and Alejandro Sisniega and Wojciech Zbijewski and Hao Dang and J. Webster Stayman and Xiaohui Wang and David H. Foos and Nafi Aygun and Vassilis Koliatsos and Jeffrey H. Siewerdsen},
url = {http://www.ncbi.nlm.nih.gov/pubmed/27025783},
doi = {10.1088/0031-9155/61/8/3180},
issn = {1361-6560},
year = {2016},
date = {2016-04-01},
journal = {Physics in medicine and biology},
volume = {61},
number = {8},
pages = {3180--207},
publisher = {IOP Publishing},
abstract = {Detection of acute intracranial hemorrhage (ICH) is important for diagnosis and treatment of traumatic brain injury, stroke, postoperative bleeding, and other head and neck injuries. This paper details the design and development of a cone-beam CT (CBCT) system developed specifically for the detection of low-contrast ICH in a form suitable for application at the point of care. Recognizing such a low-contrast imaging task to be a major challenge in CBCT, the system design began with a rigorous analysis of task-based detectability including critical aspects of system geometry, hardware configuration, and artifact correction. The imaging performance model described the three-dimensional (3D) noise-equivalent quanta using a cascaded systems model that included the effects of scatter, scatter correction, hardware considerations of complementary metal-oxide semiconductor (CMOS) and flat-panel detectors (FPDs), and digitization bit depth. The performance was analyzed with respect to a low-contrast (40-80 HU), medium-frequency task representing acute ICH detection. The task-based detectability index was computed using a non-prewhitening observer model. The optimization was performed with respect to four major design considerations: (1) system geometry (including source-to-detector distance (SDD) and source-to-axis distance (SAD)); (2) factors related to the x-ray source (including focal spot size, kVp, dose, and tube power); (3) scatter correction and selection of an antiscatter grid; and (4) x-ray detector configuration (including pixel size, additive electronics noise, field of view (FOV), and frame rate, including both CMOS and a-Si:H FPDs). Optimal design choices were also considered with respect to practical constraints and available hardware components. The model was verified in comparison to measurements on a CBCT imaging bench as a function of the numerous design parameters mentioned above. An extended geometry (SAD = 750 mm},
keywords = {CBCT, Head/Neck, System Assessment, System Design},
pubstate = {published},
tppubtype = {article}
}
Tilley, Steven; Siewerdsen, Jeffrey H.; Zbijewski, Wojciech; Stayman, J. Webster
Nonlinear statistical reconstruction for flat-panel cone-beam CT with blur and correlated noise models Proceedings Article
In: Kontos, Despina; Flohr, Thomas G.; Lo, Joseph Y. (Ed.): SPIE Medical Imaging, pp. 97830R, International Society for Optics and Photonics 2016, (Errata: The calculation for the upper bound (11) is incorrect.).
Links | BibTeX | Tags: CBCT, High-Fidelity Modeling, High-Resolution CT, MBIR
@inproceedings{tilley2016nonlinear,
title = {Nonlinear statistical reconstruction for flat-panel cone-beam CT with blur and correlated noise models},
author = {Steven Tilley and Jeffrey H. Siewerdsen and Wojciech Zbijewski and J. Webster Stayman },
editor = {Despina Kontos and Thomas G. Flohr and Joseph Y. Lo },
url = {http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4837455/},
doi = {10.1117/12.2216126},
year = {2016},
date = {2016-03-01},
booktitle = {SPIE Medical Imaging},
pages = {97830R},
organization = {International Society for Optics and Photonics},
note = {Errata: The calculation for the upper bound (11) is incorrect.},
keywords = {CBCT, High-Fidelity Modeling, High-Resolution CT, MBIR},
pubstate = {published},
tppubtype = {inproceedings}
}
Xu, Jennifer; Sisniega, Alejandro; Zbijewski, Wojciech; Dang, Hao; Stayman, J. Webster; Wang, Xiaohui; Foos, David H.; Aygun, Nafi; Koliatsos, Vassilis; Siewerdsen, Jeffrey H.
Design and characterization of a dedicated cone-beam CT scanner for detection of acute intracranial hemorrhage Proceedings Article
In: Kontos, Despina; Flohr, Thomas G.; Lo, Joseph Y. (Ed.): SPIE Medical Imaging, pp. 97830T, International Society for Optics and Photonics 2016.
Links | BibTeX | Tags: CBCT, Head/Neck, System Assessment, System Design
@inproceedings{xu2016design,
title = {Design and characterization of a dedicated cone-beam CT scanner for detection of acute intracranial hemorrhage},
author = {Jennifer Xu and Alejandro Sisniega and Wojciech Zbijewski and Hao Dang and J. Webster Stayman and Xiaohui Wang and David H. Foos and Nafi Aygun and Vassilis Koliatsos and Jeffrey H. Siewerdsen },
editor = {Despina Kontos and Thomas G. Flohr and Joseph Y. Lo },
url = {http://proceedings.spiedigitallibrary.org/proceeding.aspx?doi=10.1117/12.2216544},
doi = {10.1117/12.2216544},
year = {2016},
date = {2016-03-01},
booktitle = {SPIE Medical Imaging},
pages = {97830T},
organization = {International Society for Optics and Photonics},
keywords = {CBCT, Head/Neck, System Assessment, System Design},
pubstate = {published},
tppubtype = {inproceedings}
}
Pourmorteza, Amir; Siewerdsen, Jeffrey H.; Stayman, J. Webster
A generalized Fourier penalty in prior-image-based reconstruction for cross-platform imaging Proceedings Article
In: Kontos, Despina; Flohr, Thomas G.; Lo, Joseph Y. (Ed.): SPIE Medical Imaging, pp. 978319, International Society for Optics and Photonics 2016.
Links | BibTeX | Tags: CBCT, MBIR, Multimodality, Prior Images, Regularization Design, Sparse Sampling
@inproceedings{pourmorteza2016generalized,
title = {A generalized Fourier penalty in prior-image-based reconstruction for cross-platform imaging},
author = {Amir Pourmorteza and Jeffrey H. Siewerdsen and J. Webster Stayman},
editor = {Despina Kontos and Thomas G. Flohr and Joseph Y. Lo},
url = {http://proceedings.spiedigitallibrary.org/proceeding.aspx?doi=10.1117/12.2216151},
doi = {10.1117/12.2216151},
year = {2016},
date = {2016-03-01},
booktitle = {SPIE Medical Imaging},
pages = {978319},
organization = {International Society for Optics and Photonics},
keywords = {CBCT, MBIR, Multimodality, Prior Images, Regularization Design, Sparse Sampling},
pubstate = {published},
tppubtype = {inproceedings}
}
Tilley, Steven; Siewerdsen, Jeffrey H.; Stayman, J. Webster
Model-based iterative reconstruction for flat-panel cone-beam CT with focal spot blur, detector blur, and correlated noise. Journal Article
In: Physics in medicine and biology, vol. 61, no. 1, pp. 296–319, 2016, ISSN: 1361-6560, (Errata: [1] The fidelity terms in equations 10 and 12 are missing a multiplication by 0.5. [2] Equation 14 should be mu(x_j) = a + b erf (2 sqrt( log(2) (x_j-d) / FWHM ). [3] In section 3.2 a reference to Figure 10(e) should be 9(f).).
Abstract | Links | BibTeX | Tags: CBCT, High-Fidelity Modeling, High-Resolution CT, MBIR
@article{tilley2015model,
title = {Model-based iterative reconstruction for flat-panel cone-beam CT with focal spot blur, detector blur, and correlated noise.},
author = {Steven Tilley and Jeffrey H. Siewerdsen and J. Webster Stayman },
url = {http://www.ncbi.nlm.nih.gov/pubmed/26649783},
doi = {10.1088/0031-9155/61/1/296},
issn = {1361-6560},
year = {2016},
date = {2016-01-01},
journal = {Physics in medicine and biology},
volume = {61},
number = {1},
pages = {296--319},
publisher = {IOP Publishing},
abstract = {While model-based reconstruction methods have been successfully applied to flat-panel cone-beam CT (FP-CBCT) systems, typical implementations ignore both spatial correlations in the projection data as well as system blurs due to the detector and focal spot in the x-ray source. In this work, we develop a forward model for flat-panel-based systems that includes blur and noise correlation associated with finite focal spot size and an indirect detector (e.g. scintillator). This forward model is used to develop a staged reconstruction framework where projection data are deconvolved and log-transformed, followed by a generalized least-squares reconstruction that utilizes a non-diagonal statistical weighting to account for the correlation that arises from the acquisition and data processing chain. We investigate the performance of this novel reconstruction approach in both simulated data and in CBCT test-bench data. In comparison to traditional filtered backprojection and model-based methods that ignore noise correlation, the proposed approach yields a superior noise-resolution tradeoff. For example, for a system with 0.34 mm FWHM scintillator blur and 0.70 FWHM focal spot blur, using the correlated noise model instead of an uncorrelated noise model increased resolution by 42% (with variance matched at 6.9 × 10(-8) mm(-2)). While this advantage holds across a wide range of systems with differing blur characteristics, the improvements are greatest for systems where source blur is larger than detector blur.},
note = {Errata: [1] The fidelity terms in equations 10 and 12 are missing a multiplication by 0.5. [2] Equation 14 should be mu(x_j) = a + b erf (2 sqrt( log(2) (x_j-d) / FWHM ). [3] In section 3.2 a reference to Figure 10(e) should be 9(f).},
keywords = {CBCT, High-Fidelity Modeling, High-Resolution CT, MBIR},
pubstate = {published},
tppubtype = {article}
}
Dang, Hao; Stayman, J. Webster; Xu, Jennifer; Sisniega, Alejandro; Zbijewski, Wojciech; Wang, Xiaohui; Foos, David H.; Aygun, Nafi; Koliatsos, Vassilis; Siewerdsen, Jeffrey H.
Task-Based Regularization Design for Detection of Intracranial Hemorrhage in Cone-Beam CT Proceedings Article
In: 4th International Conference on Image Formation in X-Ray Computed Tomography, pp. 557–560, 2016.
Links | BibTeX | Tags: CBCT, Head/Neck, MBIR, Regularization Design, Task-Driven Imaging
@inproceedings{Dang2016,
title = {Task-Based Regularization Design for Detection of Intracranial Hemorrhage in Cone-Beam CT},
author = {Hao Dang and J. Webster Stayman and Jennifer Xu and Alejandro Sisniega and Wojciech Zbijewski and Xiaohui Wang and David H. Foos and Nafi Aygun and Vassilis Koliatsos and Jeffrey H. Siewerdsen },
url = {https://aiai.jhu.edu/papers/CT2016_Dang.pdf},
year = {2016},
date = {2016-01-01},
booktitle = {4th International Conference on Image Formation in X-Ray Computed Tomography},
pages = {557--560},
keywords = {CBCT, Head/Neck, MBIR, Regularization Design, Task-Driven Imaging},
pubstate = {published},
tppubtype = {inproceedings}
}
Tilley, Steven; Zbijewski, Wojciech; Siewerdsen, Jeffrey H.; Stayman, J. Webster
Modeling Shift-Variant X-Ray Focal Spot Blur for High-Resolution Flat-Panel Cone-Beam CT Proceedings Article
In: 4th International Conference on Image Formation in X-Ray Computed Tomography, pp. 463–466, 2016.
Links | BibTeX | Tags: CBCT, Extremities, High-Fidelity Modeling, High-Resolution CT, MBIR
@inproceedings{TilleyII2016,
title = {Modeling Shift-Variant X-Ray Focal Spot Blur for High-Resolution Flat-Panel Cone-Beam CT},
author = {Steven Tilley and Wojciech Zbijewski and Jeffrey H. Siewerdsen and J. Webster Stayman },
url = {https://aiai.jhu.edu/papers/CT2016_Tilley.pdf},
year = {2016},
date = {2016-01-01},
booktitle = {4th International Conference on Image Formation in X-Ray Computed Tomography},
pages = {463--466},
keywords = {CBCT, Extremities, High-Fidelity Modeling, High-Resolution CT, MBIR},
pubstate = {published},
tppubtype = {inproceedings}
}
Sisniega, Alejandro; Stayman, J. Webster; Cao, Qian; Yorkston, John; Siewerdsen, Jeffrey H.; Zbijewski, Wojciech
Motion Estimation Using a Penalized Image Sharpness Criterion for Resolution Recovery in Extremities Cone-Beam CT Proceedings Article
In: 4th International Conference on Image Formation in X-Ray Computed Tomography, pp. 549–552, 2016.
Links | BibTeX | Tags: Artifact Correction, CBCT, Extremities, High-Resolution CT, Motion Compensation
@inproceedings{Sisniega2016a,
title = {Motion Estimation Using a Penalized Image Sharpness Criterion for Resolution Recovery in Extremities Cone-Beam CT},
author = {Alejandro Sisniega and J. Webster Stayman and Qian Cao and John Yorkston and Jeffrey H. Siewerdsen and Wojciech Zbijewski },
url = {https://aiai.jhu.edu/papers/CT2016_Sisniega.pdf},
year = {2016},
date = {2016-01-01},
booktitle = {4th International Conference on Image Formation in X-Ray Computed Tomography},
pages = {549--552},
keywords = {Artifact Correction, CBCT, Extremities, High-Resolution CT, Motion Compensation},
pubstate = {published},
tppubtype = {inproceedings}
}
2015
Dang, Hao; Stayman, J. Webster; Sisniega, Alejandro; Xu, Jennifer; Zbijewski, Wojciech; Wang, Xiaohui; Foos, David H.; Aygun, Nafi; Koliatsos, Vassilis; Siewerdsen, Jeffrey H.
Statistical reconstruction for cone-beam CT with a post-artifact-correction noise model: application to high-quality head imaging. Journal Article
In: Physics in medicine and biology, vol. 60, no. 16, pp. 6153–75, 2015, ISSN: 1361-6560.
Abstract | Links | BibTeX | Tags: Artifact Correction, CBCT, Head/Neck, High-Fidelity Modeling, MBIR
@article{dang2015statistical,
title = {Statistical reconstruction for cone-beam CT with a post-artifact-correction noise model: application to high-quality head imaging.},
author = {Hao Dang and J. Webster Stayman and Alejandro Sisniega and Jennifer Xu and Wojciech Zbijewski and Xiaohui Wang and David H. Foos and Nafi Aygun and Vassilis Koliatsos and Jeffrey H. Siewerdsen },
url = {http://www.pubmedcentral.nih.gov/articlerender.fcgi?artid=PMC4545529},
doi = {10.1088/0031-9155/60/16/6153},
issn = {1361-6560},
year = {2015},
date = {2015-08-01},
journal = {Physics in medicine and biology},
volume = {60},
number = {16},
pages = {6153--75},
publisher = {IOP Publishing},
abstract = {Non-contrast CT reliably detects fresh blood in the brain and is the current front-line imaging modality for intracranial hemorrhage such as that occurring in acute traumatic brain injury (contrast ~40-80 HU, size textgreater 1 mm). We are developing flat-panel detector (FPD) cone-beam CT (CBCT) to facilitate such diagnosis in a low-cost, mobile platform suitable for point-of-care deployment. Such a system may offer benefits in the ICU, urgent care/concussion clinic, ambulance, and sports and military theatres. However, current FPD-CBCT systems face significant challenges that confound low-contrast, soft-tissue imaging. Artifact correction can overcome major sources of bias in FPD-CBCT but imparts noise amplification in filtered backprojection (FBP). Model-based reconstruction improves soft-tissue image quality compared to FBP by leveraging a high-fidelity forward model and image regularization. In this work, we develop a novel penalized weighted least-squares (PWLS) image reconstruction method with a noise model that includes accurate modeling of the noise characteristics associated with the two dominant artifact corrections (scatter and beam-hardening) in CBCT and utilizes modified weights to compensate for noise amplification imparted by each correction. Experiments included real data acquired on a FPD-CBCT test-bench and an anthropomorphic head phantom emulating intra-parenchymal hemorrhage. The proposed PWLS method demonstrated superior noise-resolution tradeoffs in comparison to FBP and PWLS with conventional weights (viz. at matched 0.50 mm spatial resolution},
keywords = {Artifact Correction, CBCT, Head/Neck, High-Fidelity Modeling, MBIR},
pubstate = {published},
tppubtype = {article}
}
Demehri, Shadpour; Muhit, Abdullah Al; Zbijewski, Wojciech; Stayman, J. Webster; Yorkston, John; Packard, Nathan; Senn, Robert; Yang, Dong; Foos, David H.; Thawait, Gaurav K.; Fayad, L. M.; Chabra, A.; Carrino, John A.; Siewerdsen, Jeffrey H.
Assessment of image quality in soft tissue and bone visualization tasks for a dedicated extremity cone-beam CT system. Journal Article
In: European radiology, vol. 25, no. 6, pp. 1742–51, 2015, ISSN: 1432-1084.
Abstract | Links | BibTeX | Tags: CBCT, Extremities, System Assessment
@article{Demehri2015,
title = {Assessment of image quality in soft tissue and bone visualization tasks for a dedicated extremity cone-beam CT system.},
author = {Shadpour Demehri and Abdullah Al Muhit and Wojciech Zbijewski and J. Webster Stayman and John Yorkston and Nathan Packard and Robert Senn and Dong Yang and David H. Foos and Gaurav K. Thawait and L. M. Fayad and A. Chabra and John A. Carrino and Jeffrey H. Siewerdsen},
url = {http://www.ncbi.nlm.nih.gov/pubmed/25599933},
doi = {10.1007/s00330-014-3546-6},
issn = {1432-1084},
year = {2015},
date = {2015-06-01},
journal = {European radiology},
volume = {25},
number = {6},
pages = {1742--51},
abstract = {OBJECTIVE To assess visualization tasks using cone-beam CT (CBCT) compared to multi-detector CT (MDCT) for musculoskeletal extremity imaging. METHODS Ten cadaveric hands and ten knees were examined using a dedicated CBCT prototype and a clinical multi-detector CT using nominal protocols (80 kVp-108mAs for CBCT; 120 kVp- 300 mAs for MDCT). Soft tissue and bone visualization tasks were assessed by four radiologists using five-point satisfaction (for CBCT and MDCT individually) and five-point preference (side-by-side CBCT versus MDCT image quality comparison) rating tests. Ratings were analyzed using Kruskal-Wallis and Wilcoxon signed-rank tests, and observer agreement was assessed using the Kappa-statistic. RESULTS Knee CBCT images were rated "excellent" or "good" (median scores 5 and 4) for "bone" and "soft tissue" visualization tasks. Hand CBCT images were rated "excellent" or "adequate" (median scores 5 and 3) for "bone" and "soft tissue" visualization tasks. Preference tests rated CBCT equivalent or superior to MDCT for bone visualization and favoured the MDCT for soft tissue visualization tasks. Intraobserver agreement for CBCT satisfaction tests was fair to almost perfect ($kappa$ ~ 0.26-0.92), and interobserver agreement was fair to moderate ($kappa$ ~ 0.27-0.54). CONCLUSION CBCT provided excellent image quality for bone visualization and adequate image quality for soft tissue visualization tasks. KEY POINTS • CBCT provided adequate image quality for diagnostic tasks in extremity imaging. • CBCT images were "excellent" for "bone" and "good/adequate" for "soft tissue" visualization tasks. • CBCT image quality was equivalent/superior to MDCT for bone visualization tasks.},
keywords = {CBCT, Extremities, System Assessment},
pubstate = {published},
tppubtype = {article}
}
Zbijewski, Wojciech; Cao, Qian; Tilley, Steven; Sisniega, Alejandro; Stayman, J. Webster; Yorkston, John; Siewerdsen, Jeffrey H.
Quantitative Assessment Of Bone And Joint Health On A Dedicated Extremities Cone-Beam CT System. Journal Article
In: International journal of computer assisted radiology and surgery, vol. 10, no. Suppl 1, pp. S29–S31, 2015, ISSN: 1861-6429.
Links | BibTeX | Tags: CBCT, Extremities, Spectral X-ray/CT
@article{zbijewski2015quantitative,
title = {Quantitative Assessment Of Bone And Joint Health On A Dedicated Extremities Cone-Beam CT System.},
author = {Wojciech Zbijewski and Qian Cao and Steven Tilley and Alejandro Sisniega and J. Webster Stayman and John Yorkston and Jeffrey H. Siewerdsen },
url = {http://www.pubmedcentral.nih.gov/articlerender.fcgi?artid=PMC4451217},
issn = {1861-6429},
year = {2015},
date = {2015-06-01},
journal = {International journal of computer assisted radiology and surgery},
volume = {10},
number = {Suppl 1},
pages = {S29--S31},
publisher = {NIH Public Access},
keywords = {CBCT, Extremities, Spectral X-ray/CT},
pubstate = {published},
tppubtype = {article}
}
Wang, Adam S.; Stayman, J. Webster; Otake, Yoshito; Vogt, Sebastian; Kleinszig, Gerhard; Siewerdsen, Jeffrey H.
Accelerated statistical reconstruction for C-arm cone-beam CT using Nesterov's method. Journal Article
In: Medical physics, vol. 42, no. 5, pp. 2699–708, 2015, ISSN: 0094-2405.
Abstract | Links | BibTeX | Tags: CBCT, Fast Algorithms, MBIR
@article{wang2014nesterov,
title = {Accelerated statistical reconstruction for C-arm cone-beam CT using Nesterov's method.},
author = {Adam S. Wang and J. Webster Stayman and Yoshito Otake and Sebastian Vogt and Gerhard Kleinszig and Jeffrey H. Siewerdsen },
url = {http://www.pubmedcentral.nih.gov/articlerender.fcgi?artid=PMC4425726},
doi = {10.1118/1.4914378},
issn = {0094-2405},
year = {2015},
date = {2015-05-01},
journal = {Medical physics},
volume = {42},
number = {5},
pages = {2699--708},
abstract = {PURPOSE To accelerate model-based iterative reconstruction (IR) methods for C-arm cone-beam CT (CBCT), thereby combining the benefits of improved image quality and/or reduced radiation dose with reconstruction times on the order of minutes rather than hours. METHODS The ordered-subsets, separable quadratic surrogates (OS-SQS) algorithm for solving the penalized-likelihood (PL) objective was modified to include Nesterov's method, which utilizes "momentum" from image updates of previous iterations to better inform the current iteration and provide significantly faster convergence. Reconstruction performance of an anthropomorphic head phantom was assessed on a benchtop CBCT system, followed by CBCT on a mobile C-arm, which provided typical levels of incomplete data, including lateral truncation. Additionally, a cadaveric torso that presented realistic soft-tissue and bony anatomy was imaged on the C-arm, and different projectors were assessed for reconstruction speed. RESULTS Nesterov's method provided equivalent image quality to OS-SQS while reducing the reconstruction time by an order of magnitude (10.0 ×) by reducing the number of iterations required for convergence. The faster projectors were shown to produce similar levels of convergence as more accurate projectors and reduced the reconstruction time by another 5.3 ×. Despite the slower convergence of IR with truncated C-arm CBCT, comparison of PL reconstruction methods implemented on graphics processing units showed that reconstruction time was reduced from 106 min for the conventional OS-SQS method to as little as 2.0 min with Nesterov's method for a volumetric reconstruction of the head. In body imaging, reconstruction of the larger cadaveric torso was reduced from 159 min down to 3.3 min with Nesterov's method. CONCLUSIONS The acceleration achieved through Nesterov's method combined with ordered subsets reduced IR times down to a few minutes. This improved compatibility with clinical workflow better enables broader adoption of IR in CBCT-guided procedures, with corresponding benefits in overcoming conventional limits of image quality at lower dose.},
keywords = {CBCT, Fast Algorithms, MBIR},
pubstate = {published},
tppubtype = {article}
}
Wang, Adam S.; Stayman, J. Webster; Otake, Yoshito; Vogt, Sebastian; Kleinszig, Gerhard; Siewerdsen, Jeffrey H.
Accelerated statistical reconstruction for C-arm cone-beam CT using Nesterov's method. Journal Article
In: Medical physics, vol. 42, no. 5, pp. 2699–708, 2015, ISSN: 0094-2405.
Abstract | Links | BibTeX | Tags: CBCT, Fast Algorithms, MBIR
@article{wang2015accelerated,
title = {Accelerated statistical reconstruction for C-arm cone-beam CT using Nesterov's method.},
author = {Adam S. Wang and J. Webster Stayman and Yoshito Otake and Sebastian Vogt and Gerhard Kleinszig and Jeffrey H. Siewerdsen },
url = {http://www.pubmedcentral.nih.gov/articlerender.fcgi?artid=PMC4425726},
doi = {10.1118/1.4914378},
issn = {0094-2405},
year = {2015},
date = {2015-05-01},
journal = {Medical physics},
volume = {42},
number = {5},
pages = {2699--708},
publisher = {American Association of Physicists in Medicine},
abstract = {PURPOSE To accelerate model-based iterative reconstruction (IR) methods for C-arm cone-beam CT (CBCT), thereby combining the benefits of improved image quality and/or reduced radiation dose with reconstruction times on the order of minutes rather than hours. METHODS The ordered-subsets, separable quadratic surrogates (OS-SQS) algorithm for solving the penalized-likelihood (PL) objective was modified to include Nesterov's method, which utilizes "momentum" from image updates of previous iterations to better inform the current iteration and provide significantly faster convergence. Reconstruction performance of an anthropomorphic head phantom was assessed on a benchtop CBCT system, followed by CBCT on a mobile C-arm, which provided typical levels of incomplete data, including lateral truncation. Additionally, a cadaveric torso that presented realistic soft-tissue and bony anatomy was imaged on the C-arm, and different projectors were assessed for reconstruction speed. RESULTS Nesterov's method provided equivalent image quality to OS-SQS while reducing the reconstruction time by an order of magnitude (10.0 ×) by reducing the number of iterations required for convergence. The faster projectors were shown to produce similar levels of convergence as more accurate projectors and reduced the reconstruction time by another 5.3 ×. Despite the slower convergence of IR with truncated C-arm CBCT, comparison of PL reconstruction methods implemented on graphics processing units showed that reconstruction time was reduced from 106 min for the conventional OS-SQS method to as little as 2.0 min with Nesterov's method for a volumetric reconstruction of the head. In body imaging, reconstruction of the larger cadaveric torso was reduced from 159 min down to 3.3 min with Nesterov's method. CONCLUSIONS The acceleration achieved through Nesterov's method combined with ordered subsets reduced IR times down to a few minutes. This improved compatibility with clinical workflow better enables broader adoption of IR in CBCT-guided procedures, with corresponding benefits in overcoming conventional limits of image quality at lower dose.},
keywords = {CBCT, Fast Algorithms, MBIR},
pubstate = {published},
tppubtype = {article}
}
Gang, Grace; Stayman, J. Webster; Ehtiati, Tina; Siewerdsen, Jeffrey H.
Task-driven image acquisition and reconstruction in cone-beam CT. Journal Article
In: Physics in medicine and biology, vol. 60, no. 8, pp. 3129–50, 2015, ISSN: 1361-6560.
Abstract | Links | BibTeX | Tags: CBCT, Customized Acquisition, MBIR, Regularization Design, Task-Driven Imaging
@article{gang2015taskb,
title = {Task-driven image acquisition and reconstruction in cone-beam CT.},
author = {Grace Gang and J. Webster Stayman and Tina Ehtiati and Jeffrey H. Siewerdsen },
url = {http://www.pubmedcentral.nih.gov/articlerender.fcgi?artid=PMC4539970},
doi = {10.1088/0031-9155/60/8/3129},
issn = {1361-6560},
year = {2015},
date = {2015-04-01},
journal = {Physics in medicine and biology},
volume = {60},
number = {8},
pages = {3129--50},
publisher = {IOP Publishing},
abstract = {This work introduces a task-driven imaging framework that incorporates a mathematical definition of the imaging task, a model of the imaging system, and a patient-specific anatomical model to prospectively design image acquisition and reconstruction techniques to optimize task performance. The framework is applied to joint optimization of tube current modulation, view-dependent reconstruction kernel, and orbital tilt in cone-beam CT. The system model considers a cone-beam CT system incorporating a flat-panel detector and 3D filtered backprojection and accurately describes the spatially varying noise and resolution over a wide range of imaging parameters in the presence of a realistic anatomical model. Task-based detectability index (d') is incorporated as the objective function in a task-driven optimization of image acquisition and reconstruction techniques. The orbital tilt was optimized through an exhaustive search across tilt angles ranging ± 30°. For each tilt angle, the view-dependent tube current and reconstruction kernel (i.e. the modulation profiles) that maximized detectability were identified via an alternating optimization. The task-driven approach was compared with conventional unmodulated and automatic exposure control (AEC) strategies for a variety of imaging tasks and anthropomorphic phantoms. The task-driven strategy outperformed the unmodulated and AEC cases for all tasks. For example, d' for a sphere detection task in a head phantom was improved by 30% compared to the unmodulated case by using smoother kernels for noisy views and distributing mAs across less noisy views (at fixed total mAs) in a manner that was beneficial to task performance. Similarly for detection of a line-pair pattern, the task-driven approach increased d' by 80% compared to no modulation by means of view-dependent mA and kernel selection that yields modulation transfer function and noise-power spectrum optimal to the task. Optimization of orbital tilt identified the tilt angle that reduced quantum noise in the region of the stimulus by avoiding highly attenuating anatomical structures. The task-driven imaging framework offers a potentially valuable paradigm for prospective definition of acquisition and reconstruction protocols that improve task performance without increase in dose.},
keywords = {CBCT, Customized Acquisition, MBIR, Regularization Design, Task-Driven Imaging},
pubstate = {published},
tppubtype = {article}
}
Ouadah, Sarah; Stayman, J. Webster; Gang, Grace; Uneri, Ali; Ehtiati, Tina; Siewerdsen, Jeffrey H.
Self-calibration of cone-beam CT geometry using 3D-2D image registration: development and application to tasked-based imaging with a robotic C-arm Proceedings Article
In: Webster, Robert J.; Yaniv, Ziv R. (Ed.): SPIE Medical Imaging, pp. 94151D, International Society for Optics and Photonics 2015.
Links | BibTeX | Tags: CBCT, Customized Acquisition, Geometric Calibration, Image Registration, Task-Driven Imaging
@inproceedings{ouadah2015self,
title = {Self-calibration of cone-beam CT geometry using 3D-2D image registration: development and application to tasked-based imaging with a robotic C-arm},
author = {Sarah Ouadah and J. Webster Stayman and Grace Gang and Ali Uneri and Tina Ehtiati and Jeffrey H. Siewerdsen },
editor = {Robert J. Webster and Ziv R. Yaniv },
url = {http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4574500/},
doi = {10.1117/12.2082538},
year = {2015},
date = {2015-03-01},
booktitle = {SPIE Medical Imaging},
pages = {94151D},
organization = {International Society for Optics and Photonics},
keywords = {CBCT, Customized Acquisition, Geometric Calibration, Image Registration, Task-Driven Imaging},
pubstate = {published},
tppubtype = {inproceedings}
}
Gang, Grace; Stayman, J. Webster; Ouadah, Sarah; Ehtiati, Tina; Siewerdsen, Jeffrey H.
Task-driven imaging in cone-beam computed tomography Best Paper Proceedings Article
In: Hoeschen, Christoph; Kontos, Despina; Flohr, Thomas G. (Ed.): SPIE Medical Imaging, pp. 941220, International Society for Optics and Photonics 2015, (1st Place Physics of Medical Imaging Student Paper ).
Links | BibTeX | Tags: CBCT, Customized Acquisition, Regularization Design, Task-Driven Imaging
@inproceedings{gang2015task,
title = {Task-driven imaging in cone-beam computed tomography},
author = {Grace Gang and J. Webster Stayman and Sarah Ouadah and Tina Ehtiati and Jeffrey H. Siewerdsen },
editor = {Christoph Hoeschen and Despina Kontos and Thomas G. Flohr},
url = {https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4457372/},
doi = {10.1117/12.2082169},
year = {2015},
date = {2015-03-01},
urldate = {2015-03-01},
booktitle = {SPIE Medical Imaging},
pages = {941220},
organization = {International Society for Optics and Photonics},
note = {1st Place Physics of Medical Imaging Student Paper },
keywords = {CBCT, Customized Acquisition, Regularization Design, Task-Driven Imaging},
pubstate = {published},
tppubtype = {inproceedings}
}
Zbijewski, Wojciech; Sisniega, Alejandro; Stayman, J. Webster; Thawait, Gaurav K.; Packard, Nathan; Yorkston, John; Demehri, Shadpour; Fritz, Jan; Siewerdsen, Jeffrey H.
Dual-energy imaging of bone marrow edema on a dedicated multi-source cone-beam CT system for the extremities Proceedings Article
In: Hoeschen, Christoph; Kontos, Despina; Flohr, Thomas G. (Ed.): SPIE Medical Imaging, pp. 94120V, International Society for Optics and Photonics 2015.
Links | BibTeX | Tags: CBCT, Extremities, Spectral X-ray/CT
@inproceedings{zbijewski2015dual,
title = {Dual-energy imaging of bone marrow edema on a dedicated multi-source cone-beam CT system for the extremities},
author = {Wojciech Zbijewski and Alejandro Sisniega and J. Webster Stayman and Gaurav K. Thawait and Nathan Packard and John Yorkston and Shadpour Demehri and Jan Fritz and Jeffrey H. Siewerdsen},
editor = {Christoph Hoeschen and Despina Kontos and Thomas G. Flohr },
url = {http://proceedings.spiedigitallibrary.org/proceeding.aspx?doi=10.1117/12.2082304},
doi = {10.1117/12.2082304},
year = {2015},
date = {2015-03-01},
booktitle = {SPIE Medical Imaging},
pages = {94120V},
organization = {International Society for Optics and Photonics},
keywords = {CBCT, Extremities, Spectral X-ray/CT},
pubstate = {published},
tppubtype = {inproceedings}
}
Sisniega, Alejandro; Zbijewski, Wojciech; Xu, Jennifer; Dang, Hao; Stayman, J. Webster; Yorkston, John; Aygun, Nafi; Koliatsos, Vassilis; Siewerdsen, Jeffrey H.
High-fidelity artifact correction for cone-beam CT imaging of the brain. Journal Article
In: Physics in medicine and biology, vol. 60, no. 4, pp. 1415–39, 2015, ISSN: 1361-6560.
Abstract | Links | BibTeX | Tags: Artifact Correction, Beam Hardening, CBCT, Head/Neck, Scatter Estimation
@article{Sisniega2015,
title = {High-fidelity artifact correction for cone-beam CT imaging of the brain.},
author = {Alejandro Sisniega and Wojciech Zbijewski and Jennifer Xu and Hao Dang and J. Webster Stayman and John Yorkston and Nafi Aygun and Vassilis Koliatsos and Jeffrey H. Siewerdsen },
url = {http://www.ncbi.nlm.nih.gov/pubmed/25611041},
doi = {10.1088/0031-9155/60/4/1415},
issn = {1361-6560},
year = {2015},
date = {2015-02-01},
journal = {Physics in medicine and biology},
volume = {60},
number = {4},
pages = {1415--39},
abstract = {CT is the frontline imaging modality for diagnosis of acute traumatic brain injury (TBI), involving the detection of fresh blood in the brain (contrast of 30-50 HU, detail size down to 1 mm) in a non-contrast-enhanced exam. A dedicated point-of-care imaging system based on cone-beam CT (CBCT) could benefit early detection of TBI and improve direction to appropriate therapy. However, flat-panel detector (FPD) CBCT is challenged by artifacts that degrade contrast resolution and limit application in soft-tissue imaging. We present and evaluate a fairly comprehensive framework for artifact correction to enable soft-tissue brain imaging with FPD CBCT. The framework includes a fast Monte Carlo (MC)-based scatter estimation method complemented by corrections for detector lag, veiling glare, and beam hardening.The fast MC scatter estimation combines GPU acceleration, variance reduction, and simulation with a low number of photon histories and reduced number of projection angles (sparse MC) augmented by kernel de-noising to yield a runtime of ~4 min per scan. Scatter correction is combined with two-pass beam hardening correction. Detector lag correction is based on temporal deconvolution of the measured lag response function. The effects of detector veiling glare are reduced by deconvolution of the glare response function representing the long range tails of the detector point-spread function. The performance of the correction framework is quantified in experiments using a realistic head phantom on a testbench for FPD CBCT.Uncorrected reconstructions were non-diagnostic for soft-tissue imaging tasks in the brain. After processing with the artifact correction framework, image uniformity was substantially improved, and artifacts were reduced to a level that enabled visualization of ~3 mm simulated bleeds throughout the brain. Non-uniformity (cupping) was reduced by a factor of 5, and contrast of simulated bleeds was improved from ~7 to 49.7 HU, in good agreement with the nominal blood contrast of 50 HU. Although noise was amplified by the corrections, the contrast-to-noise ratio (CNR) of simulated bleeds was improved by nearly a factor of 3.5 (CNR = 0.54 without corrections and 1.91 after correction). The resulting image quality motivates further development and translation of the FPD-CBCT system for imaging of acute TBI.},
keywords = {Artifact Correction, Beam Hardening, CBCT, Head/Neck, Scatter Estimation},
pubstate = {published},
tppubtype = {article}
}
Stayman, J. Webster; Gang, Grace; Siewerdsen, Jeffrey H.
Task-Based Optimization of Source-Detector Orbits in Interventional Cone-beam CT Journal Article
In: International Meeting on Fully Three-Dimensional Image Reconstruction in Radiology and Nuclear Medicine, vol. 13, 2015.
Links | BibTeX | Tags: CBCT, Customized Acquisition, MBIR, Task-Driven Imaging
@article{Stayman2015,
title = {Task-Based Optimization of Source-Detector Orbits in Interventional Cone-beam CT},
author = {J. Webster Stayman and Grace Gang and Jeffrey H. Siewerdsen },
url = {https://aiai.jhu.edu/papers/Fully3D2015_stayman.pdf},
year = {2015},
date = {2015-01-01},
journal = {International Meeting on Fully Three-Dimensional Image Reconstruction in Radiology and Nuclear Medicine},
volume = {13},
keywords = {CBCT, Customized Acquisition, MBIR, Task-Driven Imaging},
pubstate = {published},
tppubtype = {article}
}
Tilley, Steven; Siewerdsen, Jeffrey H.; Stayman, J. Webster
Generalized Penalized Weighted Least-Squares Reconstruction for Deblurred Flat-Panel CBCT Proceedings Article
In: Proceedings of the International Meeting on Fully Three-Dimensional Image Reconstruction in Radiology and Nuclear Medicine, 2015.
Links | BibTeX | Tags: CBCT, High-Fidelity Modeling, High-Resolution CT, MBIR
@inproceedings{tilley2015generalized,
title = {Generalized Penalized Weighted Least-Squares Reconstruction for Deblurred Flat-Panel CBCT},
author = {Steven Tilley and Jeffrey H. Siewerdsen and J. Webster Stayman },
url = {https://aiai.jhu.edu/papers/Fully3D2015_tilley.pdf},
year = {2015},
date = {2015-01-01},
booktitle = {Proceedings of the International Meeting on Fully Three-Dimensional Image Reconstruction in Radiology and Nuclear Medicine},
volume = {13},
keywords = {CBCT, High-Fidelity Modeling, High-Resolution CT, MBIR},
pubstate = {published},
tppubtype = {inproceedings}
}
2014
Wang, Adam S.; Stayman, J. Webster; Otake, Yoshito; Vogt, Sebastian; Kleinszig, Gerhard; Khanna, A. Jay; Gallia, Gary L.; Siewerdsen, Jeffrey H.
Low-dose preview for patient-specific, task-specific technique selection in cone-beam CT. Journal Article
In: Medical physics, vol. 41, no. 7, pp. 071915, 2014, ISSN: 0094-2405.
Abstract | Links | BibTeX | Tags: Analysis, CBCT, Regularization Design, System Assessment
@article{wang2014low,
title = {Low-dose preview for patient-specific, task-specific technique selection in cone-beam CT.},
author = {Adam S. Wang and J. Webster Stayman and Yoshito Otake and Sebastian Vogt and Gerhard Kleinszig and A. Jay Khanna and Gary L. Gallia and Jeffrey H. Siewerdsen },
url = {http://www.pubmedcentral.nih.gov/articlerender.fcgi?artid=PMC4106458},
doi = {10.1118/1.4884039},
issn = {0094-2405},
year = {2014},
date = {2014-07-01},
journal = {Medical physics},
volume = {41},
number = {7},
pages = {071915},
publisher = {American Association of Physicists in Medicine},
abstract = {PURPOSE A method is presented for generating simulated low-dose cone-beam CT (CBCT) preview images from which patient- and task-specific minimum-dose protocols can be confidently selected prospectively in clinical scenarios involving repeat scans. METHODS In clinical scenarios involving a series of CBCT images, the low-dose preview (LDP) method operates upon the first scan to create a projection dataset that accurately simulates the effects of dose reduction in subsequent scans by injecting noise of proper magnitude and correlation, including both quantum and electronic readout noise as important components of image noise in flat-panel detector CBCT. Experiments were conducted to validate the LDP method in both a head phantom and a cadaveric torso by performing CBCT acquisitions spanning a wide dose range (head: 0.8-13.2 mGy, body: 0.8-12.4 mGy) with a prototype mobile C-arm system. After injecting correlated noise to simulate dose reduction, the projections were reconstructed using both conventional filtered backprojection (FBP) and an iterative, model-based image reconstruction method (MBIR). The LDP images were then compared to real CBCT images in terms of noise magnitude, noise-power spectrum (NPS), spatial resolution, contrast, and artifacts. RESULTS For both FBP and MBIR, the LDP images exhibited accurate levels of spatial resolution and contrast that were unaffected by the correlated noise injection, as expected. Furthermore, the LDP image noise magnitude and NPS were in strong agreement with real CBCT images acquired at the corresponding, reduced dose level across the entire dose range considered. The noise magnitude agreed within 7% for both the head phantom and cadaveric torso, and the NPS showed a similar level of agreement up to the Nyquist frequency. Therefore, the LDP images were highly representative of real image quality across a broad range of dose and reconstruction methods. On the other hand, naïve injection ofuncorrelated noise resulted in strong underestimation of the true noise, which would lead to overly optimistic predictions of dose reduction. CONCLUSIONS Correlated noise injection is essential to accurate simulation of CBCT image quality at reduced dose. With the proposed LDP method, the user can prospectively select patient-specific, minimum-dose protocols (viz., acquisition technique and reconstruction method) suitable to a particular imaging task and to the user's own observer preferences for CBCT scans following the first acquisition. The method could provide dose reduction in common clinical scenarios involving multiple CBCT scans, such as image-guided surgery and radiotherapy.},
keywords = {Analysis, CBCT, Regularization Design, System Assessment},
pubstate = {published},
tppubtype = {article}
}
Stayman, J. Webster; Zbijewski, Wojciech; Tilley, Steven; Siewerdsen, Jeffrey H.
Generalized least-squares CT reconstruction with detector blur and correlated noise models Honorable Mention Proceedings Article
In: Whiting, Bruce R.; Hoeschen, Christoph (Ed.): SPIE Medical Imaging, pp. 903335, International Society for Optics and Photonics 2014, (Poster Award ).
Links | BibTeX | Tags: -Awards-, CBCT, High-Fidelity Modeling, High-Resolution CT, MBIR
@inproceedings{stayman2014generalized,
title = {Generalized least-squares CT reconstruction with detector blur and correlated noise models},
author = {J. Webster Stayman and Wojciech Zbijewski and Steven Tilley and Jeffrey H. Siewerdsen },
editor = {Bruce R. Whiting and Christoph Hoeschen},
url = {http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4201055/},
doi = {10.1117/12.2043067},
year = {2014},
date = {2014-03-01},
urldate = {2014-03-01},
booktitle = {SPIE Medical Imaging},
pages = {903335},
organization = {International Society for Optics and Photonics},
note = {Poster Award },
keywords = {-Awards-, CBCT, High-Fidelity Modeling, High-Resolution CT, MBIR},
pubstate = {published},
tppubtype = {inproceedings}
}
Carrino, John A.; Muhit, Abdullah Al; Zbijewski, Wojciech; Thawait, Gaurav K.; Stayman, J. Webster; Packard, Nathan; Senn, Robert; Yang, Dong; Foos, David H.; Yorkston, John; Siewerdsen, Jeffrey H.
Dedicated cone-beam CT system for extremity imaging. Journal Article
In: Radiology, vol. 270, no. 3, pp. 816–24, 2014, ISSN: 1527-1315.
Abstract | Links | BibTeX | Tags: CBCT, Extremities, System Assessment
@article{carrino2013dedicated,
title = {Dedicated cone-beam CT system for extremity imaging.},
author = {John A. Carrino and Abdullah Al Muhit and Wojciech Zbijewski and Gaurav K. Thawait and J. Webster Stayman and Nathan Packard and Robert Senn and Dong Yang and David H. Foos and John Yorkston and Jeffrey H. Siewerdsen },
url = {http://www.pubmedcentral.nih.gov/articlerender.fcgi?artid=PMC4263642},
doi = {10.1148/radiol.13130225},
issn = {1527-1315},
year = {2014},
date = {2014-03-01},
journal = {Radiology},
volume = {270},
number = {3},
pages = {816--24},
publisher = {Radiological Society of North America},
abstract = {PURPOSE To provide initial assessment of image quality and dose for a cone-beam computed tomographic (CT) scanner dedicated to extremity imaging. MATERIALS AND METHODS A prototype cone-beam CT scanner has been developed for imaging the extremities, including the weight-bearing lower extremities. Initial technical assessment included evaluation of radiation dose measured as a function of kilovolt peak and tube output (in milliampere seconds), contrast resolution assessed in terms of the signal difference-to-noise ratio (SDNR), spatial resolution semiquantitatively assessed by using a line-pair module from a phantom, and qualitative evaluation of cadaver images for potential diagnostic value and image artifacts by an expert CT observer (musculoskeletal radiologist). RESULTS The dose for a nominal scan protocol (80 kVp, 108 mAs) was 9 mGy (absolute dose measured at the center of a CT dose index phantom). SDNR was maximized with the 80-kVp scan technique, and contrast resolution was sufficient for visualization of muscle, fat, ligaments and/or tendons, cartilage joint space, and bone. Spatial resolution in the axial plane exceeded 15 line pairs per centimeter. Streaks associated with x-ray scatter (in thicker regions of the patient--eg, the knee), beam hardening (about cortical bone--eg, the femoral shaft), and cone-beam artifacts (at joint space surfaces oriented along the scanning plane--eg, the interphalangeal joints) presented a slight impediment to visualization. Cadaver images (elbow, hand, knee, and foot) demonstrated excellent visibility of bone detail and good soft-tissue visibility suitable to a broad spectrum of musculoskeletal indications. CONCLUSION A dedicated extremity cone-beam CT scanner capable of imaging upper and lower extremities (including weight-bearing examinations) provides sufficient image quality and favorable dose characteristics to warrant further evaluation for clinical use.},
keywords = {CBCT, Extremities, System Assessment},
pubstate = {published},
tppubtype = {article}
}
Zbijewski, Wojciech; Sisniega, Alejandro; Stayman, J. Webster; Muhit, Abdullah Al; Thawait, Gaurav K.; Packard, Nathan; Senn, Robert; Yang, Dong; Yorkston, John; Carrino, John A.; Siewerdsen, Jeffrey H.
High-performance soft-tissue imaging in extremity cone-beam CT Proceedings Article
In: Whiting, Bruce R.; Hoeschen, Christoph (Ed.): SPIE Medical Imaging, pp. 903329, International Society for Optics and Photonics 2014.
Links | BibTeX | Tags: CBCT, Extremities, Scatter Estimation, System Assessment, System Design
@inproceedings{zbijewski2014high,
title = {High-performance soft-tissue imaging in extremity cone-beam CT},
author = {Wojciech Zbijewski and Alejandro Sisniega and J. Webster Stayman and Abdullah Al Muhit and Gaurav K. Thawait and Nathan Packard and Robert Senn and Dong Yang and John Yorkston and John A. Carrino and Jeffrey H. Siewerdsen },
editor = {Bruce R. Whiting and Christoph Hoeschen },
url = {http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4112768/},
doi = {10.1117/12.2043463},
year = {2014},
date = {2014-03-01},
booktitle = {SPIE Medical Imaging},
pages = {903329},
organization = {International Society for Optics and Photonics},
keywords = {CBCT, Extremities, Scatter Estimation, System Assessment, System Design},
pubstate = {published},
tppubtype = {inproceedings}
}
Wang, Adam S.; Stayman, J. Webster; Otake, Yoshito; Khanna, A. Jay; Gallia, Gary L.; Siewerdsen, Jeffrey H.
Patient-specific minimum-dose imaging protocols for statistical image reconstruction in C-arm cone-beam CT using correlated noise injection Proceedings Article
In: Whiting, Bruce R.; Hoeschen, Christoph (Ed.): SPIE Medical Imaging, pp. 90331P, International Society for Optics and Photonics 2014.
Links | BibTeX | Tags: Analysis, CBCT, MBIR, Regularization Design, System Assessment
@inproceedings{wang2014patient,
title = {Patient-specific minimum-dose imaging protocols for statistical image reconstruction in C-arm cone-beam CT using correlated noise injection},
author = {Adam S. Wang and J. Webster Stayman and Yoshito Otake and A. Jay Khanna and Gary L. Gallia and Jeffrey H. Siewerdsen },
editor = {Bruce R. Whiting and Christoph Hoeschen },
url = {http://proceedings.spiedigitallibrary.org/proceeding.aspx?doi=10.1117/12.2043083},
doi = {10.1117/12.2043083},
year = {2014},
date = {2014-03-01},
booktitle = {SPIE Medical Imaging},
pages = {90331P},
organization = {International Society for Optics and Photonics},
keywords = {Analysis, CBCT, MBIR, Regularization Design, System Assessment},
pubstate = {published},
tppubtype = {inproceedings}
}
Zbijewski, Wojciech; Gang, Grace; Xu, Jennifer; Wang, Adam S.; Stayman, J. Webster; Taguchi, Katsuyuki; Carrino, John A.; Siewerdsen, Jeffrey H.
Dual-energy cone-beam CT with a flat-panel detector: effect of reconstruction algorithm on material classification. Journal Article
In: Medical physics, vol. 41, no. 2, pp. 021908, 2014, ISSN: 0094-2405.
Abstract | Links | BibTeX | Tags: CBCT, MBIR, Spectral X-ray/CT
@article{zbijewski2014dual,
title = {Dual-energy cone-beam CT with a flat-panel detector: effect of reconstruction algorithm on material classification.},
author = {Wojciech Zbijewski and Grace Gang and Jennifer Xu and Adam S. Wang and J. Webster Stayman and Katsuyuki Taguchi and John A. Carrino and Jeffrey H. Siewerdsen },
url = {http://www.pubmedcentral.nih.gov/articlerender.fcgi?artid=PMC3977791},
doi = {10.1118/1.4863598},
issn = {0094-2405},
year = {2014},
date = {2014-02-01},
journal = {Medical physics},
volume = {41},
number = {2},
pages = {021908},
publisher = {American Association of Physicists in Medicine},
abstract = {PURPOSE Cone-beam CT (CBCT) with a flat-panel detector (FPD) is finding application in areas such as breast and musculoskeletal imaging, where dual-energy (DE) capabilities offer potential benefit. The authors investigate the accuracy of material classification in DE CBCT using filtered backprojection (FBP) and penalized likelihood (PL) reconstruction and optimize contrast-enhanced DE CBCT of the joints as a function of dose, material concentration, and detail size. METHODS Phantoms consisting of a 15 cm diameter water cylinder with solid calcium inserts (50-200 mg/ml, 3-28.4 mm diameter) and solid iodine inserts (2-10 mg/ml, 3-28.4 mm diameter), as well as a cadaveric knee with intra-articular injection of iodine were imaged on a CBCT bench with a Varian 4343 FPD. The low energy (LE) beam was 70 kVp (+0.2 mm Cu), and the high energy (HE) beam was 120 kVp (+0.2 mm Cu, +0.5 mm Ag). Total dose (LE+HE) was varied from 3.1 to 15.6 mGy with equal dose allocation. Image-based DE classification involved a nearest distance classifier in the space of LE versus HE attenuation values. Recognizing the differences in noise between LE and HE beams, the LE and HE data were differentially filtered (in FBP) or regularized (in PL). Both a quadratic (PLQ) and a total-variation penalty (PLTV) were investigated for PL. The performance of DE CBCT material discrimination was quantified in terms of voxelwise specificity, sensitivity, and accuracy. RESULTS Noise in the HE image was primarily responsible for classification errors within the contrast inserts, whereas noise in the LE image mainly influenced classification in the surrounding water. For inserts of diameter 28.4 mm, DE CBCT reconstructions were optimized to maximize the total combined accuracy across the range of calcium and iodine concentrations, yielding values of ∼ 88% for FBP and PLQ, and ∼ 95% for PLTV at 3.1 mGy total dose, increasing to ∼ 95% for FBP and PLQ, and ∼ 98% for PLTV at 15.6 mGy total dose. For a fixed iodine concentration of 5 mg/ml and reconstructions maximizing overall accuracy across the range of insert diameters, the minimum diameter classified with accuracy textgreater80% was ∼ 15 mm for FBP and PLQ and ∼ 10 mm for PLTV, improving to ∼ 7 mm for FBP and PLQ and ∼ 3 mm for PLTV at 15.6 mGy. The results indicate similar performance for FBP and PLQ and showed improved classification accuracy with edge-preserving PLTV. A slight preference for increased smoothing of the HE data was found. DE CBCT discrimination of iodine and bone in the knee was demonstrated with FBP and PLTV at 6.2 mGy total dose. CONCLUSIONS For iodine concentrations textgreater5 mg/ml and detail size ∼ 20 mm, material classification accuracy of textgreater90% was achieved in DE CBCT with both FBP and PL at total doses textless10 mGy. Optimal performance was attained by selection of reconstruction parameters based on the differences in noise between HE and LE data, typically favoring stronger smoothing of the HE data, and by using penalties matched to the imaging task (e.g., edge-preserving PLTV in areas of uniform enhancement).},
keywords = {CBCT, MBIR, Spectral X-ray/CT},
pubstate = {published},
tppubtype = {article}
}
Wang, Adam S.; Stayman, J. Webster; Otake, Yoshito; Kleinszig, Gerhard; Vogt, Sebastian; Gallia, Gary L.; Khanna, A. Jay; Siewerdsen, Jeffrey H.
Soft-tissue imaging with C-arm cone-beam CT using statistical reconstruction. Journal Article
In: Physics in medicine and biology, vol. 59, no. 4, pp. 1005–26, 2014, ISSN: 1361-6560.
Abstract | Links | BibTeX | Tags: CBCT, Head/Neck, MBIR, System Assessment
@article{wang2014soft,
title = {Soft-tissue imaging with C-arm cone-beam CT using statistical reconstruction.},
author = {Adam S. Wang and J. Webster Stayman and Yoshito Otake and Gerhard Kleinszig and Sebastian Vogt and Gary L. Gallia and A. Jay Khanna and Jeffrey H. Siewerdsen },
url = {http://www.pubmedcentral.nih.gov/articlerender.fcgi?artid=PMC4046706},
doi = {10.1088/0031-9155/59/4/1005},
issn = {1361-6560},
year = {2014},
date = {2014-02-01},
journal = {Physics in medicine and biology},
volume = {59},
number = {4},
pages = {1005--26},
publisher = {IOP Publishing},
abstract = {The potential for statistical image reconstruction methods such as penalized-likelihood (PL) to improve C-arm cone-beam CT (CBCT) soft-tissue visualization for intraoperative imaging over conventional filtered backprojection (FBP) is assessed in this work by making a fair comparison in relation to soft-tissue performance. A prototype mobile C-arm was used to scan anthropomorphic head and abdomen phantoms as well as a cadaveric torso at doses substantially lower than typical values in diagnostic CT, and the effects of dose reduction via tube current reduction and sparse sampling were also compared. Matched spatial resolution between PL and FBP was determined by the edge spread function of low-contrast (∼ 40-80 HU) spheres in the phantoms, which were representative of soft-tissue imaging tasks. PL using the non-quadratic Huber penalty was found to substantially reduce noise relative to FBP, especially at lower spatial resolution where PL provides a contrast-to-noise ratio increase up to 1.4-2.2 × over FBP at 50% dose reduction across all objects. Comparison of sampling strategies indicates that soft-tissue imaging benefits from fully sampled acquisitions at dose above ∼ 1.7 mGy and benefits from 50% sparsity at dose below ∼ 1.0 mGy. Therefore, an appropriate sampling strategy along with the improved low-contrast visualization offered by statistical reconstruction demonstrates the potential for extending intraoperative C-arm CBCT to applications in soft-tissue interventions in neurosurgery as well as thoracic and abdominal surgeries by overcoming conventional tradeoffs in noise, spatial resolution, and dose.},
keywords = {CBCT, Head/Neck, MBIR, System Assessment},
pubstate = {published},
tppubtype = {article}
}
Tilley, Steven; Siewerdsen, Jeffrey H.; Stayman, J. Webster
Iterative CT reconstruction using models of source and detector blur and correlated noise Proceedings Article
In: Conference proceedings/International Conference on Image Formation in X-Ray Computed Tomography. International Conference on Image Formation in X-Ray Computed Tomography, pp. 363, NIH Public Access 2014.
Links | BibTeX | Tags: CBCT, High-Fidelity Modeling, High-Resolution CT, MBIR
@inproceedings{steven2014iterative,
title = {Iterative CT reconstruction using models of source and detector blur and correlated noise},
author = {Steven Tilley and Jeffrey H. Siewerdsen and J. Webster Stayman },
url = {http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4207223/},
year = {2014},
date = {2014-01-01},
booktitle = {Conference proceedings/International Conference on Image Formation in X-Ray Computed Tomography. International Conference on Image Formation in X-Ray Computed Tomography},
volume = {2014},
pages = {363},
organization = {NIH Public Access},
keywords = {CBCT, High-Fidelity Modeling, High-Resolution CT, MBIR},
pubstate = {published},
tppubtype = {inproceedings}
}
Zbijewski, Wojciech; Sisniega, Alejandro; Stayman, J. Webster; Yorkston, John; Aygun, Nafi; Koliatsos, Vassilis; Siewerdsen, Jeffrey H.
A Sparse Monte Carlo Method for High-Speed, High-Accuracy Scatter Correction for Soft-Tissue Imaging in Cone-Beam CT Proceedings Article
In: Proceedings of the International Conference on Image Formation in X-Ray Computed Tomography, pp. 401–404, 2014.
BibTeX | Tags: Artifact Correction, CBCT, Scatter Estimation
@inproceedings{zbijewski2014sparse,
title = {A Sparse Monte Carlo Method for High-Speed, High-Accuracy Scatter Correction for Soft-Tissue Imaging in Cone-Beam CT},
author = {Wojciech Zbijewski and Alejandro Sisniega and J. Webster Stayman and John Yorkston and Nafi Aygun and Vassilis Koliatsos and Jeffrey H. Siewerdsen },
year = {2014},
date = {2014-01-01},
booktitle = {Proceedings of the International Conference on Image Formation in X-Ray Computed Tomography},
volume = {3},
pages = {401--404},
keywords = {Artifact Correction, CBCT, Scatter Estimation},
pubstate = {published},
tppubtype = {inproceedings}
}
2013
Otake, Yoshito; Wang, Adam S.; Stayman, J. Webster; Uneri, Ali; Kleinszig, Gerhard; Vogt, Sebastian; Khanna, A. Jay; Gokaslan, Ziya L.; Siewerdsen, Jeffrey H.
Robust 3D-2D image registration: application to spine interventions and vertebral labeling in the presence of anatomical deformation. Journal Article
In: Physics in medicine and biology, vol. 58, no. 23, pp. 8535–53, 2013, ISSN: 1361-6560.
Abstract | Links | BibTeX | Tags: CBCT, Image Registration, Spine
@article{Otake2013,
title = {Robust 3D-2D image registration: application to spine interventions and vertebral labeling in the presence of anatomical deformation.},
author = {Yoshito Otake and Adam S. Wang and J. Webster Stayman and Ali Uneri and Gerhard Kleinszig and Sebastian Vogt and A. Jay Khanna and Ziya L. Gokaslan and Jeffrey H. Siewerdsen },
url = {http://www.pubmedcentral.nih.gov/articlerender.fcgi?artid=PMC4915373},
doi = {10.1088/0031-9155/58/23/8535},
issn = {1361-6560},
year = {2013},
date = {2013-12-01},
journal = {Physics in medicine and biology},
volume = {58},
number = {23},
pages = {8535--53},
abstract = {We present a framework for robustly estimating registration between a 3D volume image and a 2D projection image and evaluate its precision and robustness in spine interventions for vertebral localization in the presence of anatomical deformation. The framework employs a normalized gradient information similarity metric and multi-start covariance matrix adaptation evolution strategy optimization with local-restarts, which provided improved robustness against deformation and content mismatch. The parallelized implementation allowed orders-of-magnitude acceleration in computation time and improved the robustness of registration via multi-start global optimization. Experiments involved a cadaver specimen and two CT datasets (supine and prone) and 36 C-arm fluoroscopy images acquired with the specimen in four positions (supine, prone, supine with lordosis, prone with kyphosis), three regions (thoracic, abdominal, and lumbar), and three levels of geometric magnification (1.7, 2.0, 2.4). Registration accuracy was evaluated in terms of projection distance error (PDE) between the estimated and true target points in the projection image, including 14 400 random trials (200 trials on the 72 registration scenarios) with initialization error up to ±200 mm and ±10°. The resulting median PDE was better than 0.1 mm in all cases, depending somewhat on the resolution of input CT and fluoroscopy images. The cadaver experiments illustrated the tradeoff between robustness and computation time, yielding a success rate of 99.993% in vertebral labeling (with 'success' defined as PDE textless5 mm) using 1,718 664 ± 96 582 function evaluations computed in 54.0 ± 3.5 s on a mid-range GPU (nVidia, GeForce GTX690). Parameters yielding a faster search (e.g., fewer multi-starts) reduced robustness under conditions of large deformation and poor initialization (99.535% success for the same data registered in 13.1 s), but given good initialization (e.g., ±5 mm, assuming a robust initial run) the same registration could be solved with 99.993% success in 6.3 s. The ability to register CT to fluoroscopy in a manner robust to patient deformation could be valuable in applications such as radiation therapy, interventional radiology, and an assistant to target localization (e.g., vertebral labeling) in image-guided spine surgery.},
keywords = {CBCT, Image Registration, Spine},
pubstate = {published},
tppubtype = {article}
}
Sisniega, Alejandro; Zbijewski, Wojciech; Badal, Andreu; Kyprianou, Iacovos S.; Stayman, J. Webster; Vaquero, Juan J.; Siewerdsen, Jeffrey H.
Monte Carlo study of the effects of system geometry and antiscatter grids on cone-beam CT scatter distributions. Journal Article
In: Medical physics, vol. 40, no. 5, pp. 051915, 2013, ISSN: 0094-2405.
Abstract | Links | BibTeX | Tags: CBCT, Scatter Estimation, System Assessment
@article{Sisniega2013,
title = {Monte Carlo study of the effects of system geometry and antiscatter grids on cone-beam CT scatter distributions.},
author = {Alejandro Sisniega and Wojciech Zbijewski and Andreu Badal and Iacovos S. Kyprianou and J. Webster Stayman and Juan J. Vaquero and Jeffrey H. Siewerdsen },
url = {http://www.pubmedcentral.nih.gov/articlerender.fcgi?artid=PMC3651212},
doi = {10.1118/1.4801895},
issn = {0094-2405},
year = {2013},
date = {2013-05-01},
journal = {Medical physics},
volume = {40},
number = {5},
pages = {051915},
publisher = {American Association of Physicists in Medicine},
abstract = {PURPOSE The proliferation of cone-beam CT (CBCT) has created interest in performance optimization, with x-ray scatter identified among the main limitations to image quality. CBCT often contends with elevated scatter, but the wide variety of imaging geometry in different CBCT configurations suggests that not all configurations are affected to the same extent. Graphics processing unit (GPU) accelerated Monte Carlo (MC) simulations are employed over a range of imaging geometries to elucidate the factors governing scatter characteristics, efficacy of antiscatter grids, guide system design, and augment development of scatter correction. METHODS A MC x-ray simulator implemented on GPU was accelerated by inclusion of variance reduction techniques (interaction splitting, forced scattering, and forced detection) and extended to include x-ray spectra and analytical models of antiscatter grids and flat-panel detectors. The simulator was applied to small animal (SA), musculoskeletal (MSK) extremity, otolaryngology (Head), breast, interventional C-arm, and on-board (kilovoltage) linear accelerator (Linac) imaging, with an axis-to-detector distance (ADD) of 5, 12, 22, 32, 60, and 50 cm, respectively. Each configuration was modeled with and without an antiscatter grid and with (i) an elliptical cylinder varying 70-280 mm in major axis; and (ii) digital murine and anthropomorphic models. The effects of scatter were evaluated in terms of the angular distribution of scatter incident upon the detector, scatter-to-primary ratio (SPR), artifact magnitude, contrast, contrast-to-noise ratio (CNR), and visual assessment. RESULTS Variance reduction yielded improvements in MC simulation efficiency ranging from ∼17-fold (for SA CBCT) to ∼35-fold (for Head and C-arm), with the most significant acceleration due to interaction splitting (∼6 to ∼10-fold increase in efficiency). The benefit of a more extended geometry was evident by virtue of a larger air gap-e.g., for a 16 cm diameter object, the SPR reduced from 1.5 for ADD = 12 cm (MSK geometry) to 1.1 for ADD = 22 cm (Head) and to 0.5 for ADD = 60 cm (C-arm). Grid efficiency was higher for configurations with shorter air gap due to a broader angular distribution of scattered photons-e.g., scatter rejection factor ∼0.8 for MSK geometry versus ∼0.65 for C-arm. Grids reduced cupping for all configurations but had limited improvement on scatter-induced streaks and resulted in a loss of CNR for the SA, Breast, and C-arm. Relative contribution of forward-directed scatter increased with a grid (e.g., Rayleigh scatter fraction increasing from ∼0.15 without a grid to ∼0.25 with a grid for the MSK configuration), resulting in scatter distributions with greater spatial variation (the form of which depended on grid orientation). CONCLUSIONS A fast MC simulator combining GPU acceleration with variance reduction provided a systematic examination of a range of CBCT configurations in relation to scatter, highlighting the magnitude and spatial uniformity of individual scatter components, illustrating tradeoffs in CNR and artifacts and identifying the system geometries for which grids are more beneficial (e.g., MSK) from those in which an extended geometry is the better defense (e.g., C-arm head imaging). Compact geometries with an antiscatter grid challenge assumptions of slowly varying scatter distributions due to increased contribution of Rayleigh scatter.},
keywords = {CBCT, Scatter Estimation, System Assessment},
pubstate = {published},
tppubtype = {article}
}
Wang, Adam S.; Schafer, Sebastian; Stayman, J. Webster; Otake, Yoshito; Sussman, Marc S.; Khanna, A. Jay; Gallia, Gary L.; Siewerdsen, Jeffrey H.
Soft-tissue imaging in low-dose, C-arm cone-beam CT using statistical image reconstruction Proceedings Article
In: Nishikawa, Robert M.; Whiting, Bruce R. (Ed.): SPIE Medical Imaging, pp. 86681F, International Society for Optics and Photonics 2013.
Links | BibTeX | Tags: CBCT, MBIR
@inproceedings{wang2013soft,
title = {Soft-tissue imaging in low-dose, C-arm cone-beam CT using statistical image reconstruction},
author = {Adam S. Wang and Sebastian Schafer and J. Webster Stayman and Yoshito Otake and Marc S. Sussman and A. Jay Khanna and Gary L. Gallia and Jeffrey H. Siewerdsen},
editor = {Robert M. Nishikawa and Bruce R. Whiting },
url = {http://proceedings.spiedigitallibrary.org/proceeding.aspx?doi=10.1117/12.2008421},
doi = {10.1117/12.2008421},
year = {2013},
date = {2013-03-01},
booktitle = {SPIE Medical Imaging},
pages = {86681F},
organization = {International Society for Optics and Photonics},
keywords = {CBCT, MBIR},
pubstate = {published},
tppubtype = {inproceedings}
}
Schafer, Sebastian; Wang, Adam S.; Otake, Yoshito; Stayman, J. Webster; Zbijewski, Wojciech; Kleinszig, Gerhard; Xia, Xuewei; Gallia, Gary L.; Siewerdsen, Jeffrey H.
Intraoperative imaging for patient safety and QA: detection of intracranial hemorrhage using C-arm cone-beam CT Proceedings Article
In: III, David R. Holmes; Yaniv, Ziv R. (Ed.): SPIE Medical Imaging, pp. 86711X, International Society for Optics and Photonics 2013.
Links | BibTeX | Tags: CBCT, Head/Neck, System Assessment
@inproceedings{schafer2013intraoperative,
title = {Intraoperative imaging for patient safety and QA: detection of intracranial hemorrhage using C-arm cone-beam CT},
author = {Sebastian Schafer and Adam S. Wang and Yoshito Otake and J. Webster Stayman and Wojciech Zbijewski and Gerhard Kleinszig and Xuewei Xia and Gary L. Gallia and Jeffrey H. Siewerdsen},
editor = {David R. Holmes III and Ziv R. Yaniv },
url = {http://proceedings.spiedigitallibrary.org/proceeding.aspx?doi=10.1117/12.2008043},
doi = {10.1117/12.2008043},
year = {2013},
date = {2013-03-01},
booktitle = {SPIE Medical Imaging},
pages = {86711X},
organization = {International Society for Optics and Photonics},
keywords = {CBCT, Head/Neck, System Assessment},
pubstate = {published},
tppubtype = {inproceedings}
}
Zbijewski, Wojciech; Gang, Grace; Wang, Adam S.; Stayman, J. Webster; Taguchi, Katsuyuki; Carrino, John A.; Siewerdsen, Jeffrey H.
Noise reduction in material decomposition for low-dose dual-energy cone-beam CT Proceedings Article
In: Nishikawa, Robert M.; Whiting, Bruce R. (Ed.): SPIE Medical Imaging, pp. 866819, International Society for Optics and Photonics 2013.
Links | BibTeX | Tags: CBCT, MBIR, Spectral X-ray/CT
@inproceedings{zbijewski2013noise,
title = {Noise reduction in material decomposition for low-dose dual-energy cone-beam CT},
author = {Wojciech Zbijewski and Grace Gang and Adam S. Wang and J. Webster Stayman and Katsuyuki Taguchi and John A. Carrino and Jeffrey H. Siewerdsen },
editor = {Robert M. Nishikawa and Bruce R. Whiting},
url = {http://proceedings.spiedigitallibrary.org/proceeding.aspx?doi=10.1117/12.2008431},
doi = {10.1117/12.2008431},
year = {2013},
date = {2013-03-01},
booktitle = {SPIE Medical Imaging},
pages = {866819},
organization = {International Society for Optics and Photonics},
keywords = {CBCT, MBIR, Spectral X-ray/CT},
pubstate = {published},
tppubtype = {inproceedings}
}
Uneri, Ali; Nithiananthan, Sajendra; Schafer, Sebastian; Otake, Yoshito; Stayman, J. Webster; Kleinszig, Gerhard; Sussman, Marc S.; Prince, Jerry L.; Siewerdsen, Jeffrey H.
In: Medical physics, vol. 40, no. 1, pp. 017501, 2013, ISSN: 0094-2405.
Abstract | Links | BibTeX | Tags: CBCT, Image Registration, Lungs
@article{uneri2013deformable,
title = {Deformable registration of the inflated and deflated lung in cone-beam CT-guided thoracic surgery: initial investigation of a combined model- and image-driven approach.},
author = {Ali Uneri and Sajendra Nithiananthan and Sebastian Schafer and Yoshito Otake and J. Webster Stayman and Gerhard Kleinszig and Marc S. Sussman and Jerry L. Prince and Jeffrey H. Siewerdsen },
url = {http://www.pubmedcentral.nih.gov/articlerender.fcgi?artid=PMC3537709},
doi = {10.1118/1.4767757},
issn = {0094-2405},
year = {2013},
date = {2013-01-01},
journal = {Medical physics},
volume = {40},
number = {1},
pages = {017501},
publisher = {American Association of Physicists in Medicine},
abstract = {PURPOSE Surgical resection is the preferred modality for curative treatment of early stage lung cancer, but localization of small tumors (textless10 mm diameter) during surgery presents a major challenge that is likely to increase as more early-stage disease is detected incidentally and in low-dose CT screening. To overcome the difficulty of manual localization (fingers inserted through intercostal ports) and the cost, logistics, and morbidity of preoperative tagging (coil or dye placement under CT-fluoroscopy), the authors propose the use of intraoperative cone-beam CT (CBCT) and deformable image registration to guide targeting of small tumors in video-assisted thoracic surgery (VATS). A novel algorithm is reported for registration of the lung from its inflated state (prior to pleural breach) to the deflated state (during resection) to localize surgical targets and adjacent critical anatomy. METHODS The registration approach geometrically resolves images of the inflated and deflated lung using a coarse model-driven stage followed by a finer image-driven stage. The model-driven stage uses image features derived from the lung surfaces and airways: triangular surface meshes are morphed to capture bulk motion; concurrently, the airways generate graph structures from which corresponding nodes are identified. Interpolation of the sparse motion fields computed from the bounding surface and interior airways provides a 3D motion field that coarsely registers the lung and initializes the subsequent image-driven stage. The image-driven stage employs an intensity-corrected, symmetric form of the Demons method. The algorithm was validated over 12 datasets, obtained from porcine specimen experiments emulating CBCT-guided VATS. Geometric accuracy was quantified in terms of target registration error (TRE) in anatomical targets throughout the lung, and normalized cross-correlation. Variations of the algorithm were investigated to study the behavior of the model- and image-driven stages by modifying individual algorithmic steps and examining the effect in comparison to the nominal process. RESULTS The combined model- and image-driven registration process demonstrated accuracy consistent with the requirements of minimally invasive VATS in both target localization (∼3-5 mm within the target wedge) and critical structure avoidance (∼1-2 mm). The model-driven stage initialized the registration to within a median TRE of 1.9 mm (95% confidence interval (CI) maximum = 5.0 mm), while the subsequent image-driven stage yielded higher accuracy localization with 0.6 mm median TRE (95% CI maximum = 4.1 mm). The variations assessing the individual algorithmic steps elucidated the role of each step and in some cases identified opportunities for further simplification and improvement in computational speed. CONCLUSIONS The initial studies show the proposed registration method to successfully register CBCT images of the inflated and deflated lung. Accuracy appears sufficient to localize the target and adjacent critical anatomy within ∼1-2 mm and guide localization under conditions in which the target cannot be discerned directly in CBCT (e.g., subtle, nonsolid tumors). The ability to directly localize tumors in the operating room could provide a valuable addition to the VATS arsenal, obviate the cost, logistics, and morbidity of preoperative tagging, and improve patient safety. Future work includes in vivo testing, optimization of workflow, and integration with a CBCT image guidance system.},
keywords = {CBCT, Image Registration, Lungs},
pubstate = {published},
tppubtype = {article}
}
Wang, Adam S.; Stayman, J. Webster; Otake, Yoshito; Kleinszig, Gerhard; Vogt, Sebastian; Khanna, A. Jay; Gokaslan, Ziya L.; Siewerdsen, Jeffrey H.
Statistical Reconstruction for Soft Tissue Imaging with Low Dose C-arm Cone-Beam CT Proceedings Article
In: Proceedings of the International Meeting on Fully Three-Dimensional Image Reconstruction in Radiology and Nuclear Medicine, 2013.
@inproceedings{wang2013statistical,
title = {Statistical Reconstruction for Soft Tissue Imaging with Low Dose C-arm Cone-Beam CT},
author = {Adam S. Wang and J. Webster Stayman and Yoshito Otake and Gerhard Kleinszig and Sebastian Vogt and A. Jay Khanna and Ziya L. Gokaslan and Jeffrey H. Siewerdsen },
year = {2013},
date = {2013-01-01},
booktitle = {Proceedings of the International Meeting on Fully Three-Dimensional Image Reconstruction in Radiology and Nuclear Medicine},
volume = {12},
keywords = {CBCT, MBIR},
pubstate = {published},
tppubtype = {inproceedings}
}
Stayman, J. Webster; Siewerdsen, Jeffrey H.
Task-Based Trajectories in Iteratively Reconstructed Interventional Cone-Beam CT Proceedings Article
In: Proceedings of the International Meeting on Fully Three-Dimensional Image Reconstruction in Radiology and Nuclear Medicine, pp. 257–260, 2013.
Links | BibTeX | Tags: CBCT, Customized Acquisition, MBIR, Task-Driven Imaging
@inproceedings{stayman2013task,
title = {Task-Based Trajectories in Iteratively Reconstructed Interventional Cone-Beam CT},
author = {J. Webster Stayman and Jeffrey H. Siewerdsen },
url = {https://aiai.jhu.edu/papers/20130204_Fully3D_Abstract.pdf},
year = {2013},
date = {2013-01-01},
booktitle = {Proceedings of the International Meeting on Fully Three-Dimensional Image Reconstruction in Radiology and Nuclear Medicine},
pages = {257--260},
keywords = {CBCT, Customized Acquisition, MBIR, Task-Driven Imaging},
pubstate = {published},
tppubtype = {inproceedings}
}
2012
Dang, Hao; Otake, Yoshito; Schafer, Sebastian; Stayman, J. Webster; Kleinszig, Gerhard; Siewerdsen, Jeffrey H.
Robust methods for automatic image-to-world registration in cone-beam CT interventional guidance. Journal Article
In: Medical physics, vol. 39, no. 10, pp. 6484–98, 2012, ISSN: 0094-2405.
Abstract | Links | BibTeX | Tags: CBCT, Image Guided Surgery
@article{dang2012robust,
title = {Robust methods for automatic image-to-world registration in cone-beam CT interventional guidance.},
author = {Hao Dang and Yoshito Otake and Sebastian Schafer and J. Webster Stayman and Gerhard Kleinszig and Jeffrey H. Siewerdsen },
url = {http://www.pubmedcentral.nih.gov/articlerender.fcgi?artid=PMC3477200},
doi = {10.1118/1.4754589},
issn = {0094-2405},
year = {2012},
date = {2012-10-01},
journal = {Medical physics},
volume = {39},
number = {10},
pages = {6484--98},
publisher = {American Association of Physicists in Medicine},
abstract = {PURPOSE Real-time surgical navigation relies on accurate image-to-world registration to align the coordinate systems of the image and patient. Conventional manual registration can present a workflow bottleneck and is prone to manual error and intraoperator variability. This work reports alternative means of automatic image-to-world registration, each method involving an automatic registration marker (ARM) used in conjunction with C-arm cone-beam CT (CBCT). The first involves a Known-Model registration method in which the ARM is a predefined tool, and the second is a Free-Form method in which the ARM is freely configurable. METHODS Studies were performed using a prototype C-arm for CBCT and a surgical tracking system. A simple ARM was designed with markers comprising a tungsten sphere within infrared reflectors to permit detection of markers in both x-ray projections and by an infrared tracker. The Known-Model method exercised a predefined specification of the ARM in combination with 3D-2D registration to estimate the transformation that yields the optimal match between forward projection of the ARM and the measured projection images. The Free-Form method localizes markers individually in projection data by a robust Hough transform approach extended from previous work, backprojected to 3D image coordinates based on C-arm geometric calibration. Image-domain point sets were transformed to world coordinates by rigid-body point-based registration. The robustness and registration accuracy of each method was tested in comparison to manual registration across a range of body sites (head, thorax, and abdomen) of interest in CBCT-guided surgery, including cases with interventional tools in the radiographic scene. RESULTS The automatic methods exhibited similar target registration error (TRE) and were comparable or superior to manual registration for placement of the ARM within ∼200 mm of C-arm isocenter. Marker localization in projection data was robust across all anatomical sites, including challenging scenarios involving the presence of interventional tools. The reprojection error of marker localization was independent of the distance of the ARM from isocenter, and the overall TRE was dominated by the configuration of individual fiducials and distance from the target as predicted by theory. The median TRE increased with greater ARM-to-isocenter distance (e.g., for the Free-Form method, TRE increasing from 0.78 mm to 2.04 mm at distances of ∼75 mm and 370 mm, respectively). The median TRE within ∼200 mm distance was consistently lower than that of the manual method (TRE = 0.82 mm). Registration performance was independent of anatomical site (head, thorax, and abdomen). The Free-Form method demonstrated a statistically significant improvement (p = 0.0044) in reproducibility compared to manual registration (0.22 mm versus 0.30 mm, respectively). CONCLUSIONS Automatic image-to-world registration methods demonstrate the potential for improved accuracy, reproducibility, and workflow in CBCT-guided procedures. A Free-Form method was shown to exhibit robustness against anatomical site, with comparable or improved TRE compared to manual registration. It was also comparable or superior in performance to a Known-Model method in which the ARM configuration is specified as a predefined tool, thereby allowing configuration of fiducials on the fly or attachment to the patient.},
keywords = {CBCT, Image Guided Surgery},
pubstate = {published},
tppubtype = {article}
}
Nithiananthan, Sajendra; Schafer, Sebastian; Mirota, Daniel J.; Stayman, J. Webster; Zbijewski, Wojciech; Reh, Douglas D.; Gallia, Gary L.; Siewerdsen, Jeffrey H.
Extra-dimensional Demons: a method for incorporating missing tissue in deformable image registration. Journal Article
In: Medical physics, vol. 39, no. 9, pp. 5718–31, 2012, ISSN: 0094-2405.
Abstract | Links | BibTeX | Tags: CBCT, Image Guided Surgery, Image Registration
@article{Nithiananthan2012,
title = {Extra-dimensional Demons: a method for incorporating missing tissue in deformable image registration.},
author = {Sajendra Nithiananthan and Sebastian Schafer and Daniel J. Mirota and J. Webster Stayman and Wojciech Zbijewski and Douglas D. Reh and Gary L. Gallia and Jeffrey H. Siewerdsen },
url = {http://www.pubmedcentral.nih.gov/articlerender.fcgi?artid=PMC3443194},
doi = {10.1118/1.4747270},
issn = {0094-2405},
year = {2012},
date = {2012-09-01},
journal = {Medical physics},
volume = {39},
number = {9},
pages = {5718--31},
abstract = {PURPOSE A deformable registration method capable of accounting for missing tissue (e.g., excision) is reported for application in cone-beam CT (CBCT)-guided surgical procedures. Excisions are identified by a segmentation step performed simultaneous to the registration process. Tissue excision is explicitly modeled by increasing the dimensionality of the deformation field to allow motion beyond the dimensionality of the image. The accuracy of the model is tested in phantom, simulations, and cadaver models. METHODS A variant of the Demons deformable registration algorithm is modified to include excision segmentation and modeling. Segmentation is performed iteratively during the registration process, with initial implementation using a threshold-based approach to identify voxels corresponding to "tissue" in the moving image and "air" in the fixed image. With each iteration of the Demons process, every voxel is assigned a probability of excision. Excisions are modeled explicitly during registration by increasing the dimensionality of the deformation field so that both deformations and excisions can be accounted for by in- and out-of-volume deformations, respectively. The out-of-volume (i.e., fourth) component of the deformation field at each voxel carries a magnitude proportional to the excision probability computed in the excision segmentation step. The registration accuracy of the proposed "extra-dimensional" Demons (XDD) and conventional Demons methods was tested in the presence of missing tissue in phantom models, simulations investigating the effect of excision size on registration accuracy, and cadaver studies emulating realistic deformations and tissue excisions imparted in CBCT-guided endoscopic skull base surgery. RESULTS Phantom experiments showed the normalized mutual information (NMI) in regions local to the excision to improve from 1.10 for the conventional Demons approach to 1.16 for XDD, and qualitative examination of the resulting images revealed major differences: the conventional Demons approach imparted unrealistic distortions in areas around tissue excision, whereas XDD provided accurate "ejection" of voxels within the excision site and maintained the registration accuracy throughout the rest of the image. Registration accuracy in areas far from the excision site (e.g., textgreater ∼5 mm) was identical for the two approaches. Quantitation of the effect was consistent in analysis of NMI, normalized cross-correlation (NCC), target registration error (TRE), and accuracy of voxels ejected from the volume (true-positive and false-positive analysis). The registration accuracy for conventional Demons was found to degrade steeply as a function of excision size, whereas XDD was robust in this regard. Cadaver studies involving realistic excision of the clivus, vidian canal, and ethmoid sinuses demonstrated similar results, with unrealistic distortion of anatomy imparted by conventional Demons and accurate ejection and deformation for XDD. CONCLUSIONS Adaptation of the Demons deformable registration process to include segmentation (i.e., identification of excised tissue) and an extra dimension in the deformation field provided a means to accurately accommodate missing tissue between image acquisitions. The extra-dimensional approach yielded accurate "ejection" of voxels local to the excision site while preserving the registration accuracy (typically subvoxel) of the conventional Demons approach throughout the rest of the image. The ability to accommodate missing tissue volumes is important to application of CBCT for surgical guidance (e.g., skull base drillout) and may have application in other areas of CBCT guidance.},
keywords = {CBCT, Image Guided Surgery, Image Registration},
pubstate = {published},
tppubtype = {article}
}
Reaungamornrat, Sureerat; Otake, Yoshito; Uneri, Ali; Schafer, Sebastian; Mirota, Daniel J.; Nithiananthan, Sajendra; Stayman, J. Webster; Kleinszig, Gerhard; Khanna, A. Jay; Taylor, Russell H.; Siewerdsen, Jeffrey H.
An on-board surgical tracking and video augmentation system for C-arm image guidance. Journal Article
In: International journal of computer assisted radiology and surgery, vol. 7, no. 5, pp. 647–65, 2012, ISSN: 1861-6429.
Abstract | Links | BibTeX | Tags: CBCT, Image Guided Surgery, Multimodality
@article{reaungamornrat2012board,
title = {An on-board surgical tracking and video augmentation system for C-arm image guidance.},
author = {Sureerat Reaungamornrat and Yoshito Otake and Ali Uneri and Sebastian Schafer and Daniel J. Mirota and Sajendra Nithiananthan and J. Webster Stayman and Gerhard Kleinszig and A. Jay Khanna and Russell H. Taylor and Jeffrey H. Siewerdsen },
url = {http://www.ncbi.nlm.nih.gov/pubmed/22539008},
doi = {10.1007/s11548-012-0682-9},
issn = {1861-6429},
year = {2012},
date = {2012-09-01},
journal = {International journal of computer assisted radiology and surgery},
volume = {7},
number = {5},
pages = {647--65},
publisher = {Springer-Verlag},
abstract = {PURPOSE Conventional tracker configurations for surgical navigation carry a variety of limitations, including limited geometric accuracy, line-of-sight obstruction, and mismatch of the view angle with the surgeon's-eye view. This paper presents the development and characterization of a novel tracker configuration (referred to as "Tracker-on-C") intended to address such limitations by incorporating the tracker directly on the gantry of a mobile C-arm for fluoroscopy and cone-beam CT (CBCT). METHODS A video-based tracker (MicronTracker, Claron Technology Inc., Toronto, ON, Canada) was mounted on the gantry of a prototype mobile isocentric C-arm next to the flat-panel detector. To maintain registration within a dynamically moving reference frame (due to rotation of the C-arm), a reference marker consisting of 6 faces (referred to as a "hex-face marker") was developed to give visibility across the full range of C-arm rotation. Three primary functionalities were investigated: surgical tracking, generation of digitally reconstructed radiographs (DRRs) from the perspective of a tracked tool or the current C-arm angle, and augmentation of the tracker video scene with image, DRR, and planning data. Target registration error (TRE) was measured in comparison with the same tracker implemented in a conventional in-room configuration. Graphics processing unit (GPU)-accelerated DRRs were generated in real time as an assistant to C-arm positioning (i.e., positioning the C-arm such that target anatomy is in the field-of-view (FOV)), radiographic search (i.e., a virtual X-ray projection preview of target anatomy without X-ray exposure), and localization (i.e., visualizing the location of the surgical target or planning data). Video augmentation included superimposing tracker data, the X-ray FOV, DRRs, planning data, preoperative images, and/or intraoperative CBCT onto the video scene. Geometric accuracy was quantitatively evaluated in each case, and qualitative assessment of clinical feasibility was analyzed by an experienced and fellowship-trained orthopedic spine surgeon within a clinically realistic surgical setup of the Tracker-on-C. RESULTS The Tracker-on-C configuration demonstrated improved TRE (0.87 ± 0.25) mm in comparison with a conventional in-room tracker setup (1.92 ± 0.71) mm (p textless 0.0001) attributed primarily to improved depth resolution of the stereoscopic camera placed closer to the surgical field. The hex-face reference marker maintained registration across the 180° C-arm orbit (TRE = 0.70 ± 0.32 mm). DRRs generated from the perspective of the C-arm X-ray detector demonstrated sub- mm accuracy (0.37 ± 0.20 mm) in correspondence with the real X-ray image. Planning data and DRRs overlaid on the video scene exhibited accuracy of (0.59 ± 0.38) pixels and (0.66 ± 0.36) pixels, respectively. Preclinical assessment suggested potential utility of the Tracker-on-C in a spectrum of interventions, including improved line of sight, an assistant to C-arm positioning, and faster target localization, while reducing X-ray exposure time. CONCLUSIONS The proposed tracker configuration demonstrated sub- mm TRE from the dynamic reference frame of a rotational C-arm through the use of the multi-face reference marker. Real-time DRRs and video augmentation from a natural perspective over the operating table assisted C-arm setup, simplified radiographic search and localization, and reduced fluoroscopy time. Incorporation of the proposed tracker configuration with C-arm CBCT guidance has the potential to simplify intraoperative registration, improve geometric accuracy, enhance visualization, and reduce radiation exposure.},
keywords = {CBCT, Image Guided Surgery, Multimodality},
pubstate = {published},
tppubtype = {article}
}
Otake, Yoshito; Schafer, Sebastian; Stayman, J. Webster; Zbijewski, Wojciech; Kleinszig, Gerhard; Graumann, Rainer; Khanna, A. Jay; Siewerdsen, Jeffrey H.
Automatic localization of vertebral levels in x-ray fluoroscopy using 3D-2D registration: a tool to reduce wrong-site surgery. Journal Article
In: Physics in medicine and biology, vol. 57, no. 17, pp. 5485–508, 2012, ISSN: 1361-6560.
Abstract | Links | BibTeX | Tags: CBCT, Image Guided Surgery, Image Registration, Multimodality, Spine
@article{otake2012automaticb,
title = {Automatic localization of vertebral levels in x-ray fluoroscopy using 3D-2D registration: a tool to reduce wrong-site surgery.},
author = {Yoshito Otake and Sebastian Schafer and J. Webster Stayman and Wojciech Zbijewski and Gerhard Kleinszig and Rainer Graumann and A. Jay Khanna and Jeffrey H. Siewerdsen },
url = {http://www.pubmedcentral.nih.gov/articlerender.fcgi?artid=PMC3429949},
doi = {10.1088/0031-9155/57/17/5485},
issn = {1361-6560},
year = {2012},
date = {2012-09-01},
journal = {Physics in medicine and biology},
volume = {57},
number = {17},
pages = {5485--508},
publisher = {IOP Publishing},
abstract = {Surgical targeting of the incorrect vertebral level (wrong-level surgery) is among the more common wrong-site surgical errors, attributed primarily to the lack of uniquely identifiable radiographic landmarks in the mid-thoracic spine. The conventional localization method involves manual counting of vertebral bodies under fluoroscopy, is prone to human error and carries additional time and dose. We propose an image registration and visualization system (referred to as LevelCheck), for decision support in spine surgery by automatically labeling vertebral levels in fluoroscopy using a GPU-accelerated, intensity-based 3D-2D (namely CT-to-fluoroscopy) registration. A gradient information (GI) similarity metric and a CMA-ES optimizer were chosen due to their robustness and inherent suitability for parallelization. Simulation studies involved ten patient CT datasets from which 50 000 simulated fluoroscopic images were generated from C-arm poses selected to approximate the C-arm operator and positioning variability. Physical experiments used an anthropomorphic chest phantom imaged under real fluoroscopy. The registration accuracy was evaluated as the mean projection distance (mPD) between the estimated and true center of vertebral levels. Trials were defined as successful if the estimated position was within the projection of the vertebral body (namely mPD textless5 mm). Simulation studies showed a success rate of 99.998% (1 failure in 50 000 trials) and computation time of 4.7 s on a midrange GPU. Analysis of failure modes identified cases of false local optima in the search space arising from longitudinal periodicity in vertebral structures. Physical experiments demonstrated the robustness of the algorithm against quantum noise and x-ray scatter. The ability to automatically localize target anatomy in fluoroscopy in near-real-time could be valuable in reducing the occurrence of wrong-site surgery while helping to reduce radiation exposure. The method is applicable beyond the specific case of vertebral labeling, since any structure defined in pre-operative (or intra-operative) CT or cone-beam CT can be automatically registered to the fluoroscopic scene.},
keywords = {CBCT, Image Guided Surgery, Image Registration, Multimodality, Spine},
pubstate = {published},
tppubtype = {article}
}
Lee, Stella; Gallia, Gary L.; Reh, Douglas D.; Schafer, Sebastian; Uneri, Ali; Mirota, Daniel J.; Nithiananthan, Sajendra; Otake, Yoshito; Stayman, J. Webster; Zbijewski, Wojciech; Siewerdsen, Jeffrey H.
Intraoperative C-arm cone-beam computed tomography: quantitative analysis of surgical performance in skull base surgery. Journal Article
In: The Laryngoscope, vol. 122, no. 9, pp. 1925–32, 2012, ISSN: 1531-4995.
Abstract | Links | BibTeX | Tags: CBCT, Head/Neck, Image Guided Surgery, System Assessment
@article{lee2012intraoperative,
title = {Intraoperative C-arm cone-beam computed tomography: quantitative analysis of surgical performance in skull base surgery.},
author = {Stella Lee and Gary L. Gallia and Douglas D. Reh and Sebastian Schafer and Ali Uneri and Daniel J. Mirota and Sajendra Nithiananthan and Yoshito Otake and J. Webster Stayman and Wojciech Zbijewski and Jeffrey H. Siewerdsen },
url = {http://www.pubmedcentral.nih.gov/articlerender.fcgi?artid=PMC3725328},
doi = {10.1002/lary.23374},
issn = {1531-4995},
year = {2012},
date = {2012-09-01},
journal = {The Laryngoscope},
volume = {122},
number = {9},
pages = {1925--32},
publisher = {Wiley Subscription Services, Inc., A Wiley Company},
abstract = {OBJECTIVES/HYPOTHESIS To determine whether incorporation of intraoperative imaging via a new cone-beam computed tomography (CBCT) image-guidance system improves accuracy and facilitates resection in sinus and skull-base surgery through quantification of surgical performance. STUDY DESIGN Landmark identification and skull base ablation tasks were performed with a CBCT intraoperative image-guidance system in the experimental group and with image-guided surgery (IGS) alone based on preoperative computed tomography (CT) in the control group. METHODS Six cadaveric heads underwent preoperative CT imaging and surgical planning identifying surgical targets. Three types of surgical tasks were planned: landmark point identification, line contour identification, and volume drill-out. Key anatomic structures (carotid artery and optic nerve) were chosen for landmark identification and line contour tasks. Complete ethmoidectomy, vidian corridor drill-out, and clival resection were performed for volume ablation tasks. The CBCT guidance system was used in the experimental group and performance was assessed by metrics of target registration error, sensitivity, and specificity of excision. RESULTS Significant improvements were seen for point identification and line tracing tasks. Additional resection was performed in 67% of tasks in the CBCT group, and qualitative feedback indicated unequivocal improvement in confidence for all tasks. In review of tasks in the control group, additional resection would have been performed in 35% of tasks if an intraoperative image was available. CONCLUSIONS An experimental prototype C-arm CBCT guidance system was shown to improve surgical precision in the identification of skull base targets and increase accuracy in the ablation of surgical target volumes in comparison to using IGS alone.},
keywords = {CBCT, Head/Neck, Image Guided Surgery, System Assessment},
pubstate = {published},
tppubtype = {article}
}
Lee, Junghoon; Stayman, J. Webster; Otake, Yoshito; Schafer, Sebastian; Zbijewski, Wojciech; Khanna, A. Jay; Prince, Jerry L.; Siewerdsen, Jeffrey H.
Volume-of-change cone-beam CT for image-guided surgery. Journal Article
In: Physics in medicine and biology, vol. 57, no. 15, pp. 4969–89, 2012, ISSN: 1361-6560.
Abstract | Links | BibTeX | Tags: CBCT, Image Guided Surgery, MBIR, Prior Images, Sparse Sampling, Spine
@article{Lee2012,
title = {Volume-of-change cone-beam CT for image-guided surgery.},
author = {Junghoon Lee and J. Webster Stayman and Yoshito Otake and Sebastian Schafer and Wojciech Zbijewski and A. Jay Khanna and Jerry L. Prince and Jeffrey H. Siewerdsen },
url = {http://www.pubmedcentral.nih.gov/articlerender.fcgi?artid=PMC3432954},
doi = {10.1088/0031-9155/57/15/4969},
issn = {1361-6560},
year = {2012},
date = {2012-08-01},
journal = {Physics in medicine and biology},
volume = {57},
number = {15},
pages = {4969--89},
abstract = {C-arm cone-beam CT (CBCT) can provide intraoperative 3D imaging capability for surgical guidance, but workflow and radiation dose are the significant barriers to broad utilization. One main reason is that each 3D image acquisition requires a complete scan with a full radiation dose to present a completely new 3D image every time. In this paper, we propose to utilize patient-specific CT or CBCT as prior knowledge to accurately reconstruct the aspects of the region that have changed by the surgical procedure from only a sparse set of x-rays. The proposed methods consist of a 3D-2D registration between the prior volume and a sparse set of intraoperative x-rays, creating digitally reconstructed radiographs (DRRs) from the registered prior volume, computing difference images by subtracting DRRs from the intraoperative x-rays, a penalized likelihood reconstruction of the volume of change (VOC) from the difference images, and finally a fusion of VOC reconstruction with the prior volume to visualize the entire surgical field. When the surgical changes are local and relatively small, the VOC reconstruction involves only a small volume size and a small number of projections, allowing less computation and lower radiation dose than is needed to reconstruct the entire surgical field. We applied this approach to sacroplasty phantom data obtained from a CBCT test bench and vertebroplasty data with a fresh cadaver acquired from a C-arm CBCT system with a flat-panel detector. The VOCs were reconstructed from a varying number of images (10-66 images) and compared to the CBCT ground truth using four different metrics (mean squared error, correlation coefficient, structural similarity index and perceptual difference model). The results show promising reconstruction quality with structural similarity to the ground truth close to 1 even when only 15-20 images were used, allowing dose reduction by the factor of 10-20.},
keywords = {CBCT, Image Guided Surgery, MBIR, Prior Images, Sparse Sampling, Spine},
pubstate = {published},
tppubtype = {article}
}
Reaungamornrat, Sureerat; Otake, Yoshito; Uneri, Ali; Schafer, Sebastian; Mirota, Daniel J.; Nithiananthan, Sajendra; Stayman, J. Webster; Khanna, A. Jay; Reh, Douglas D.; Gallia, Gary L.; Taylor, Russell H.; Siewerdsen, Jeffrey H.
Tracker-on-C for cone-beam CT-guided surgery: evaluation of geometric accuracy and clinical applications Proceedings Article
In: III, David R. Holmes; Wong, Kenneth H. (Ed.): SPIE Medical Imaging, pp. 831609, International Society for Optics and Photonics 2012.
Links | BibTeX | Tags: CBCT, Image Guided Surgery
@inproceedings{reaungamornrat2012tracker,
title = {Tracker-on-C for cone-beam CT-guided surgery: evaluation of geometric accuracy and clinical applications},
author = {Sureerat Reaungamornrat and Yoshito Otake and Ali Uneri and Sebastian Schafer and Daniel J. Mirota and Sajendra Nithiananthan and J. Webster Stayman and A. Jay Khanna and Douglas D. Reh and Gary L. Gallia and Russell H. Taylor and Jeffrey H. Siewerdsen },
editor = {David R. Holmes III and Kenneth H. Wong },
url = {http://proceedings.spiedigitallibrary.org/proceeding.aspx?doi=10.1117/12.911454},
doi = {10.1117/12.911454},
year = {2012},
date = {2012-02-01},
booktitle = {SPIE Medical Imaging},
pages = {831609},
organization = {International Society for Optics and Photonics},
keywords = {CBCT, Image Guided Surgery},
pubstate = {published},
tppubtype = {inproceedings}
}
Schafer, Sebastian; Otake, Yoshito; Uneri, Ali; Mirota, Daniel J.; Nithiananthan, Sajendra; Stayman, J. Webster; Zbijewski, Wojciech; Kleinszig, Gerhard; Graumann, Rainer; Sussman, Marc S.; Siewerdsen, Jeffrey H.
High-performance C-arm cone-beam CT guidance of thoracic surgery Proceedings Article
In: III, David R. Holmes; Wong, Kenneth H. (Ed.): SPIE Medical Imaging, pp. 83161I, International Society for Optics and Photonics 2012.
Links | BibTeX | Tags: CBCT, Image Guided Surgery, System Assessment
@inproceedings{schafer2012high,
title = {High-performance C-arm cone-beam CT guidance of thoracic surgery},
author = {Sebastian Schafer and Yoshito Otake and Ali Uneri and Daniel J. Mirota and Sajendra Nithiananthan and J. Webster Stayman and Wojciech Zbijewski and Gerhard Kleinszig and Rainer Graumann and Marc S. Sussman and Jeffrey H. Siewerdsen },
editor = {David R. Holmes III and Kenneth H. Wong },
url = {http://proceedings.spiedigitallibrary.org/proceeding.aspx?doi=10.1117/12.911811},
doi = {10.1117/12.911811},
year = {2012},
date = {2012-02-01},
booktitle = {SPIE Medical Imaging},
pages = {83161I},
organization = {International Society for Optics and Photonics},
keywords = {CBCT, Image Guided Surgery, System Assessment},
pubstate = {published},
tppubtype = {inproceedings}
}
Uneri, Ali; Nithiananthan, Sajendra; Schafer, Sebastian; Otake, Yoshito; Stayman, J. Webster; Kleinszig, Gerhard; Sussman, Marc S.; Taylor, Russell H.; Prince, Jerry L.; Siewerdsen, Jeffrey H.
Deformable registration of the inflated and deflated lung for cone-beam CT-guided thoracic surgery Proceedings Article
In: III, David R. Holmes; Wong, Kenneth H. (Ed.): SPIE Medical Imaging, pp. 831602, International Society for Optics and Photonics 2012.
Links | BibTeX | Tags: CBCT, Image Guided Surgery, Image Registration, Lungs
@inproceedings{uneri2012deformable,
title = {Deformable registration of the inflated and deflated lung for cone-beam CT-guided thoracic surgery},
author = {Ali Uneri and Sajendra Nithiananthan and Sebastian Schafer and Yoshito Otake and J. Webster Stayman and Gerhard Kleinszig and Marc S. Sussman and Russell H. Taylor and Jerry L. Prince and Jeffrey H. Siewerdsen },
editor = {David R. Holmes III and Kenneth H. Wong },
url = {http://proceedings.spiedigitallibrary.org/proceeding.aspx?doi=10.1117/12.911440},
doi = {10.1117/12.911440},
year = {2012},
date = {2012-02-01},
booktitle = {SPIE Medical Imaging},
pages = {831602},
organization = {International Society for Optics and Photonics},
keywords = {CBCT, Image Guided Surgery, Image Registration, Lungs},
pubstate = {published},
tppubtype = {inproceedings}
}
Gang, Grace; Zbijewski, Wojciech; Stayman, J. Webster; Carrino, John A.; Siewerdsen, Jeffrey H.
Theoretical framework for the dual-energy cone-beam CT noise-power spectrum NEQ and tasked-based detectability index Proceedings Article
In: Pelc, Norbert J.; Nishikawa, Robert M.; Whiting, Bruce R. (Ed.): SPIE Medical Imaging, pp. 83131J, International Society for Optics and Photonics 2012.
Links | BibTeX | Tags: Analysis, CBCT, Spectral X-ray/CT, Task-Driven Imaging
@inproceedings{gang2012theoretical,
title = {Theoretical framework for the dual-energy cone-beam CT noise-power spectrum NEQ and tasked-based detectability index},
author = {Grace Gang and Wojciech Zbijewski and J. Webster Stayman and John A. Carrino and Jeffrey H. Siewerdsen },
editor = {Norbert J. Pelc and Robert M. Nishikawa and Bruce R. Whiting },
url = {http://proceedings.spiedigitallibrary.org/proceeding.aspx?doi=10.1117/12.911817},
doi = {10.1117/12.911817},
year = {2012},
date = {2012-02-01},
booktitle = {SPIE Medical Imaging},
pages = {83131J},
organization = {International Society for Optics and Photonics},
keywords = {Analysis, CBCT, Spectral X-ray/CT, Task-Driven Imaging},
pubstate = {published},
tppubtype = {inproceedings}
}
Schafer, Sebastian; Stayman, J. Webster; Zbijewski, Wojciech; Schmidgunst, Christian; Kleinszig, Gerhard; Siewerdsen, Jeffrey H.
Antiscatter grids in mobile C-arm cone-beam CT: effect on image quality and dose. Journal Article
In: Medical physics, vol. 39, no. 1, pp. 153–9, 2012, ISSN: 0094-2405.
Abstract | Links | BibTeX | Tags: CBCT, Scatter Estimation
@article{schafer2012antiscatter,
title = {Antiscatter grids in mobile C-arm cone-beam CT: effect on image quality and dose.},
author = {Sebastian Schafer and J. Webster Stayman and Wojciech Zbijewski and Christian Schmidgunst and Gerhard Kleinszig and Jeffrey H. Siewerdsen },
url = {http://www.pubmedcentral.nih.gov/articlerender.fcgi?artid=PMC3261054},
doi = {10.1118/1.3666947},
issn = {0094-2405},
year = {2012},
date = {2012-01-01},
journal = {Medical physics},
volume = {39},
number = {1},
pages = {153--9},
publisher = {American Association of Physicists in Medicine},
abstract = {PURPOSE X-ray scatter is a major detriment to image quality in cone-beam CT (CBCT). Existing geometries exhibit strong differences in scatter susceptibility with more compact geometries, e.g., dental or musculoskeletal, benefiting from antiscatter grids, whereas in more extended geometries, e.g., IGRT, grid use carries tradeoffs in image quality per unit dose. This work assesses the tradeoffs in dose and image quality for grids applied in the context of low-dose CBCT on a mobile C-arm for image-guided surgery. METHODS Studies were performed on a mobile C-arm equipped with a flat-panel detector for high-quality CBCT. Antiscatter grids of grid ratio (GR) 6:1-12:1, 40 lp∕cm, were tested in "body" surgery, i.e., spine, using protocols for bone and soft-tissue visibility in the thoracic and abdominal spine. Studies focused on grid orientation, CT number accuracy, image noise, and contrast-to-noise ratio (CNR) in quantitative phantoms at constant dose. RESULTS There was no effect of grid orientation on possible gridline artifacts, given accurate angle-dependent gain calibration. Incorrect calibration was found to result in gridline shadows in the projection data that imparted high-frequency artifacts in 3D reconstructions. Increasing GR reduced errors in CT number from 31%, thorax, and 37%, abdomen, for gridless operation to 2% and 10%, respectively, with a 12:1 grid, while image noise increased by up to 70%. The CNR of high-contrast objects was largely unaffected by grids, but low-contrast soft-tissues suffered reduction in CNR, 2%-65%, across the investigated GR at constant dose. CONCLUSIONS While grids improved CT number accuracy, soft-tissue CNR was reduced due to attenuation of primary radiation. CNR could be restored by increasing dose by factors of ~1.6-2.5 depending on GR, e.g., increase from 4.6 mGy for the thorax and 12.5 mGy for the abdomen without antiscatter grids to approximately 12 mGy and 30 mGy, respectively, with a high-GR grid. However, increasing the dose poses a significant impediment to repeat intraoperative CBCT and can cause the cumulative intraoperative dose to exceed that of a single diagnostic CT scan. This places the mobile C-arm in the category of extended CBCT geometries with sufficient air gap for which the tradeoffs between CNR and dose typically do not favor incorporation of an antiscatter grid.},
keywords = {CBCT, Scatter Estimation},
pubstate = {published},
tppubtype = {article}
}
2011
Prakash, Prakhar; Zbijewski, Wojciech; Gang, Grace; Ding, Yifu; Stayman, J. Webster; Yorkston, John; Carrino, John A.; Siewerdsen, Jeffrey H.
Task-based modeling and optimization of a cone-beam CT scanner for musculoskeletal imaging. Journal Article
In: Medical physics, vol. 38, no. 10, pp. 5612–29, 2011, ISSN: 0094-2405.
Abstract | Links | BibTeX | Tags: Analysis, CBCT, Extremities, System Design
@article{prakash2011task,
title = {Task-based modeling and optimization of a cone-beam CT scanner for musculoskeletal imaging.},
author = {Prakhar Prakash and Wojciech Zbijewski and Grace Gang and Yifu Ding and J. Webster Stayman and John Yorkston and John A. Carrino and Jeffrey H. Siewerdsen },
url = {http://www.pubmedcentral.nih.gov/articlerender.fcgi?artid=PMC3208412},
doi = {10.1118/1.3633937},
issn = {0094-2405},
year = {2011},
date = {2011-10-01},
journal = {Medical physics},
volume = {38},
number = {10},
pages = {5612--29},
publisher = {American Association of Physicists in Medicine},
abstract = {PURPOSE This work applies a cascaded systems model for cone-beam CT imaging performance to the design and optimization of a system for musculoskeletal extremity imaging. The model provides a quantitative guide to the selection of system geometry, source and detector components, acquisition techniques, and reconstruction parameters. METHODS The model is based on cascaded systems analysis of the 3D noise-power spectrum (NPS) and noise-equivalent quanta (NEQ) combined with factors of system geometry (magnification, focal spot size, and scatter-to-primary ratio) and anatomical background clutter. The model was extended to task-based analysis of detectability index (d') for tasks ranging in contrast and frequency content, and d' was computed as a function of system magnification, detector pixel size, focal spot size, kVp, dose, electronic noise, voxel size, and reconstruction filter to examine trade-offs and optima among such factors in multivariate analysis. The model was tested quantitatively versus the measured NPS and qualitatively in cadaver images as a function of kVp, dose, pixel size, and reconstruction filter under conditions corresponding to the proposed scanner. RESULTS The analysis quantified trade-offs among factors of spatial resolution, noise, and dose. System magnification (M) was a critical design parameter with strong effect on spatial resolution, dose, and x-ray scatter, and a fairly robust optimum was identified at M ∼ 1.3 for the imaging tasks considered. The results suggested kVp selection in the range of ∼65-90 kVp, the lower end (65 kVp) maximizing subject contrast and the upper end maximizing NEQ (90 kVp). The analysis quantified fairly intuitive results-e.g., ∼0.1-0.2 mm pixel size (and a sharp reconstruction filter) optimal for high-frequency tasks (bone detail) compared to ∼0.4 mm pixel size (and a smooth reconstruction filter) for low-frequency (soft-tissue) tasks. This result suggests a specific protocol for 1 × 1 (full-resolution) projection data acquisition followed by full-resolution reconstruction with a sharp filter for high-frequency tasks along with 2 × 2 binning reconstruction with a smooth filter for low-frequency tasks. The analysis guided selection of specific source and detector components implemented on the proposed scanner. The analysis also quantified the potential benefits and points of diminishing return in focal spot size, reduced electronic noise, finer detector pixels, and low-dose limits of detectability. Theoretical results agreed quantitatively with the measured NPS and qualitatively with evaluation of cadaver images by a musculoskeletal radiologist. CONCLUSIONS A fairly comprehensive model for 3D imaging performance in cone-beam CT combines factors of quantum noise, system geometry, anatomical background, and imaging task. The analysis provided a valuable, quantitative guide to design, optimization, and technique selection for a musculoskeletal extremities imaging system under development.},
keywords = {Analysis, CBCT, Extremities, System Design},
pubstate = {published},
tppubtype = {article}
}
Schafer, Sebastian; Nithiananthan, Sajendra; Mirota, Daniel J.; Uneri, Ali; Stayman, J. Webster; Zbijewski, Wojciech; Schmidgunst, Christian; Kleinszig, Gerhard; Khanna, A. Jay; Siewerdsen, Jeffrey H.
Mobile C-arm cone-beam CT for guidance of spine surgery: image quality, radiation dose, and integration with interventional guidance. Journal Article
In: Medical physics, vol. 38, no. 8, pp. 4563–74, 2011, ISSN: 0094-2405.
Abstract | Links | BibTeX | Tags: CBCT, Image Guided Surgery, Spine, System Assessment
@article{schafer2011mobile,
title = {Mobile C-arm cone-beam CT for guidance of spine surgery: image quality, radiation dose, and integration with interventional guidance.},
author = {Sebastian Schafer and Sajendra Nithiananthan and Daniel J. Mirota and Ali Uneri and J. Webster Stayman and Wojciech Zbijewski and Christian Schmidgunst and Gerhard Kleinszig and A. Jay Khanna and Jeffrey H. Siewerdsen },
url = {http://www.ncbi.nlm.nih.gov/pubmed/21928628 http://www.pubmedcentral.nih.gov/articlerender.fcgi?artid=PMC3161502},
doi = {10.1118/1.3597566},
issn = {0094-2405},
year = {2011},
date = {2011-08-01},
journal = {Medical physics},
volume = {38},
number = {8},
pages = {4563--74},
publisher = {American Association of Physicists in Medicine},
abstract = {PURPOSE A flat-panel detector based mobile isocentric C-arm for cone-beam CT (CBCT) has been developed to allow intraoperative 3D imaging with sub-millimeter spatial resolution and soft-tissue visibility. Image quality and radiation dose were evaluated in spinal surgery, commonly relying on lower-performance image intensifier based mobile C-arms. Scan protocols were developed for task-specific imaging at minimum dose, in-room exposure was evaluated, and integration of the imaging system with a surgical guidance system was demonstrated in preclinical studies of minimally invasive spine surgery. METHODS Radiation dose was assessed as a function of kilovolt (peak) (80-120 kVp) and milliampere second using thoracic and lumbar spine dosimetry phantoms. In-room radiation exposure was measured throughout the operating room for various CBCT scan protocols. Image quality was assessed using tissue-equivalent inserts in chest and abdomen phantoms to evaluate bone and soft-tissue contrast-to-noise ratio as a function of dose, and task-specific protocols (i.e., visualization of bone or soft-tissues) were defined. Results were applied in preclinical studies using a cadaveric torso simulating minimally invasive, transpedicular surgery. RESULTS Task-specific CBCT protocols identified include: thoracic bone visualization (100 kVp; 60 mAs; 1.8 mGy); lumbar bone visualization (100 kVp; 130 mAs; 3.2 mGy); thoracic soft-tissue visualization (100 kVp; 230 mAs; 4.3 mGy); and lumbar soft-tissue visualization (120 kVp; 460 mAs; 10.6 mGy)--each at (0.3 x 0.3 x 0.9 mm3) voxel size. Alternative lower-dose, lower-resolution soft-tissue visualization protocols were identified (100 kVp; 230 mAs; 5.1 mGy) for the lumbar region at (0.3 x 0.3 x 1.5 mm3) voxel size. Half-scan orbit of the C-arm (x-ray tube traversing under the table) was dosimetrically advantageous (prepatient attenuation) with a nonuniform dose distribution (-2 x higher at the entrance side than at isocenter, and -3-4 lower at the exit side). The in-room dose (microsievert) per unit scan dose (milligray) ranged from -21 microSv/mGy on average at tableside to -0.1 microSv/mGy at 2.0 m distance to isocenter. All protocols involve surgical staff stepping behind a shield wall for each CBCT scan, therefore imparting -zero dose to staff. Protocol implementation in preclinical cadaveric studies demonstrate integration of the C-arm with a navigation system for spine surgery guidance-specifically, minimally invasive vertebroplasty in which the system provided accurate guidance and visualization of needle placement and bone cement distribution. Cumulative dose including multiple intraoperative scans was -11.5 mGy for CBCT-guided thoracic vertebroplasty and -23.2 mGy for lumbar vertebroplasty, with dose to staff at tableside reduced to -1 min of fluoroscopy time (-4(0-60 microSv), compared to 5-11 min for the conventional approach. CONCLUSIONS Intraoperative CBCT using a high-performance mobile C-arm prototype demonstrates image quality suitable to guidance of spine surgery, with task-specific protocols providing an important basis for minimizing radiation dose, while maintaining image quality sufficient for surgical guidance. Images demonstrate a significant advance in spatial resolution and soft-tissue visibility, and CBCT guidance offers the potential to reduce fluoroscopy reliance, reducing cumulative dose to patient and staff. Integration with a surgical guidance system demonstrates precise tracking and visualization in up-to-date images (alleviating reliance on preoperative images only), including detection of errors or suboptimal surgical outcomes in the operating room.},
keywords = {CBCT, Image Guided Surgery, Spine, System Assessment},
pubstate = {published},
tppubtype = {article}
}
Zbijewski, Wojciech; Jean, Paul De; Prakash, Prakhar; Ding, Yifu; Stayman, J. Webster; Packard, Nathan; Senn, Robert; Yang, Dong; Yorkston, John; Machado, Antonio; Carrino, John A.; Siewerdsen, Jeffrey H.
A dedicated cone-beam CT system for musculoskeletal extremities imaging: design, optimization, and initial performance characterization. Journal Article
In: Medical physics, vol. 38, no. 8, pp. 4700–13, 2011, ISSN: 0094-2405.
Abstract | Links | BibTeX | Tags: Analysis, CBCT, Extremities, System Assessment, System Design
@article{zbijewski2011dedicated,
title = {A dedicated cone-beam CT system for musculoskeletal extremities imaging: design, optimization, and initial performance characterization.},
author = {Wojciech Zbijewski and Paul De Jean and Prakhar Prakash and Yifu Ding and J. Webster Stayman and Nathan Packard and Robert Senn and Dong Yang and John Yorkston and Antonio Machado and John A. Carrino and Jeffrey H. Siewerdsen },
url = {http://www.pubmedcentral.nih.gov/articlerender.fcgi?artid=PMC3172864},
doi = {10.1118/1.3611039},
issn = {0094-2405},
year = {2011},
date = {2011-08-01},
journal = {Medical physics},
volume = {38},
number = {8},
pages = {4700--13},
publisher = {American Association of Physicists in Medicine},
abstract = {PURPOSE This paper reports on the design and initial imaging performance of a dedicated cone-beam CT (CBCT) system for musculoskeletal (MSK) extremities. The system complements conventional CT and MR and offers a variety of potential clinical and logistical advantages that are likely to be of benefit to diagnosis, treatment planning, and assessment of therapy response in MSK radiology, orthopaedic surgery, and rheumatology. METHODS The scanner design incorporated a host of clinical requirements (e.g., ability to scan the weight-bearing knee in a natural stance) and was guided by theoretical and experimental analysis of image quality and dose. Such criteria identified the following basic scanner components and system configuration: a flat-panel detector (FPD, Varian 3030+, 0.194 mm pixels); and a low-power, fixed anode x-ray source with 0.5 mm focal spot (SourceRay XRS-125-7K-P, 0.875 kW) mounted on a retractable C-arm allowing for two scanning orientations with the capability for side entry, viz. a standing configuration for imaging of weight-bearing lower extremities and a sitting configuration for imaging of tensioned upper extremity and unloaded lower extremity. Theoretical modeling employed cascaded systems analysis of modulation transfer function (MTF) and detective quantum efficiency (DQE) computed as a function of system geometry, kVp and filtration, dose, source power, etc. Physical experimentation utilized an imaging bench simulating the scanner geometry for verification of theoretical results and investigation of other factors, such as antiscatter grid selection and 3D image quality in phantom and cadaver, including qualitative comparison to conventional CT. RESULTS Theoretical modeling and benchtop experimentation confirmed the basic suitability of the FPD and x-ray source mentioned above. Clinical requirements combined with analysis of MTF and DQE yielded the following system geometry: a -55 cm source-to-detector distance; 1.3 magnification; a 20 cm diameter bore (20 x 20 x 20 cm3 field of view); total acquisition arc of -240 degrees. The system MTF declines to 50% at -1.3 mm(-1) and to 10% at -2.7 mm(-1), consistent with sub-millimeter spatial resolution. Analysis of DQE suggested a nominal technique of 90 kVp (+0.3 mm Cu added filtration) to provide high imaging performance from -500 projections at less than -0.5 kW power, implying -6.4 mGy (0.064 mSv) for low-dose protocols and -15 mGy (0.15 mSv) for high-quality protocols. The experimental studies show improved image uniformity and contrast-to-noise ratio (without increase in dose) through incorporation of a custom 10:1 GR antiscatter grid. Cadaver images demonstrate exquisite bone detail, visualization of articular morphology, and soft-tissue visibility comparable to diagnostic CT (10-20 HU contrast resolution). CONCLUSIONS The results indicate that the proposed system will deliver volumetric images of the extremities with soft-tissue contrast resolution comparable to diagnostic CT and improved spatial resolution at potentially reduced dose. Cascaded systems analysis provided a useful basis for system design and optimization without costly repeated experimentation. A combined process of design specification, image quality analysis, clinical feedback, and revision yielded a prototype that is now awaiting clinical pilot studies. Potential advantages of the proposed system include reduced space and cost, imaging of load-bearing extremities, and combined volumetric imaging with real-time fluoroscopy and digital radiography.},
keywords = {Analysis, CBCT, Extremities, System Assessment, System Design},
pubstate = {published},
tppubtype = {article}
}
Gang, Grace; Lee, Junghoon; Stayman, J. Webster; Mirota, Daniel J.; Zbijewski, Wojciech; Prince, Jerry L.; Siewerdsen, Jeffrey H.
Analysis of Fourier-domain task-based detectability index in tomosynthesis and cone-beam CT in relation to human observer performance. Journal Article
In: Medical physics, vol. 38, no. 4, pp. 1754–68, 2011, ISSN: 0094-2405.
Abstract | Links | BibTeX | Tags: Analysis, CBCT, Task-Driven Imaging
@article{Gang2011,
title = {Analysis of Fourier-domain task-based detectability index in tomosynthesis and cone-beam CT in relation to human observer performance.},
author = {Grace Gang and Junghoon Lee and J. Webster Stayman and Daniel J. Mirota and Wojciech Zbijewski and Jerry L. Prince and Jeffrey H. Siewerdsen },
url = {http://www.pubmedcentral.nih.gov/articlerender.fcgi?artid=PMC3069989},
doi = {10.1118/1.3560428},
issn = {0094-2405},
year = {2011},
date = {2011-04-01},
journal = {Medical physics},
volume = {38},
number = {4},
pages = {1754--68},
institution = {Institute of Biomaterials and Biomedical Engineering, University of Toronto, Toronto, Ontario M5G 2M9, Canada.},
abstract = {PURPOSE Design and optimization of medical imaging systems benefit from accurate theoretical modeling that identifies the physical factors governing image quality, particularly in the early stages of system development. This work extends Fourier metrics of imaging performance and detectability index (d') to tomosynthesis and cone-beam CT (CBCT) and investigates the extent to which d' is a valid descriptor of task-based imaging performance as assessed by human observers, METHODS The detectability index for tasks presented in 2D slices (d'(slice)) was derived from 3D cascaded systems analysis of tomosynthesis and CBCT. Anatomical background noise measured in a physical phantom presenting power-law spectral density was incorporated in the "generalized" noise-equivalent quanta. Theoretical calculations of d'(slice) were performed as a function of total angular extent (theta(tot)) of source-detector orbit ranging 10 degrees - 360 degrees under two acquisition schemes: (i) Constant angular separation between projections (constant-delta theta), giving variable number of projections (N(proj)) and dose vs theta(tot) and (ii) constant number of projections (constant-N(proj)), giving constant dose (but variable angular sampling) with theta(tot). Five simple observer models were investigated: Prewhitening (PW), prewhitening with eye filter and internal noise (PWEi), nonprewhitening (NPW), nonprewhitening with eye filter (NPWE), and nonprewhitening with eye filter and internal noise (NPWEi). Human observer performance was measured in 9AFC tests for five simple imaging tasks presented within uniform and power-law clutter backgrounds. Measurements (from 9AFC tests) and theoretical calculations (from cascaded systems analysis of d'(slice)) were compared in terms of area under the ROC curve (A(z)) RESULTS Reasonable correspondence between theoretical calculations and human observer performance was achieved for all imaging tasks over the broad range of experimental conditions and acquisition schemes. The PW and PWEi observer models tended to overestimate detectability, while the various NPW models predicted observer performance fairly well, with NPWEi giving the best overall agreement. Detectability was shown to increase with theta(tot) due to the reduction of out-of-plane clutter, reaching a plateau after a particular theta(tot) that depended on the imaging task. Depending on the acquisition scheme, however (i.e., constant-N(proj) or delta theta), detectability was seen in some cases to decline at higher theta(tot) due to tradeoffs among quantum noise, background clutter, and view sampling. CONCLUSIONS Generalized detectability index derived from a 3D cascaded systems model shows reasonable correspondence with human observer performance over a fairly broad range of imaging tasks and conditions, although discrepancies were observed in cases relating to orbits intermediate to 180 degrees and 360 degrees. The basic correspondence of theoretical and measured performance supports the application of such a theoretical framework for system design and optimization of tomosynthesis and CBCT.},
keywords = {Analysis, CBCT, Task-Driven Imaging},
pubstate = {published},
tppubtype = {article}
}
Nithiananthan, Sajendra; Schafer, Sebastian; Uneri, Ali; Mirota, Daniel J.; Stayman, J. Webster; Zbijewski, Wojciech; Brock, Kristy K.; Daly, Michael J.; Chan, Harley; Irish, Jonathan C.; Siewerdsen, Jeffrey H.
Demons deformable registration of CT and cone-beam CT using an iterative intensity matching approach. Journal Article
In: Medical physics, vol. 38, no. 4, pp. 1785–98, 2011, ISSN: 0094-2405.
Abstract | Links | BibTeX | Tags: CBCT, Image Registration, Multimodality
@article{Nithiananthan2011,
title = {Demons deformable registration of CT and cone-beam CT using an iterative intensity matching approach.},
author = {Sajendra Nithiananthan and Sebastian Schafer and Ali Uneri and Daniel J. Mirota and J. Webster Stayman and Wojciech Zbijewski and Kristy K. Brock and Michael J. Daly and Harley Chan and Jonathan C. Irish and Jeffrey H. Siewerdsen},
url = {http://www.pubmedcentral.nih.gov/articlerender.fcgi?artid=PMC3069990},
doi = {10.1118/1.3555037},
issn = {0094-2405},
year = {2011},
date = {2011-04-01},
journal = {Medical physics},
volume = {38},
number = {4},
pages = {1785--98},
abstract = {PURPOSE A method of intensity-based deformable registration of CT and cone-beam CT (CBCT) images is described, in which intensity correction occurs simultaneously within the iterative registration process. The method preserves the speed and simplicity of the popular Demons algorithm while providing robustness and accuracy in the presence of large mismatch between CT and CBCT voxel values ("intensity"). METHODS A variant of the Demons algorithm was developed in which an estimate of the relationship between CT and CBCT intensity values for specific materials in the image is computed at each iteration based on the set of currently overlapping voxels. This tissue-specific intensity correction is then used to estimate the registration output for that iteration and the process is repeated. The robustness of the method was tested in CBCT images of a cadaveric head exhibiting a broad range of simulated intensity variations associated with x-ray scatter, object truncation, and/or errors in the reconstruction algorithm. The accuracy of CT-CBCT registration was also measured in six real cases, exhibiting deformations ranging from simple to complex during surgery or radiotherapy guided by a CBCT-capable C-arm or linear accelerator, respectively. RESULTS The iterative intensity matching approach was robust against all levels of intensity variation examined, including spatially varying errors in voxel value of a factor of 2 or more, as can be encountered in cases of high x-ray scatter. Registration accuracy without intensity matching degraded severely with increasing magnitude of intensity error and introduced image distortion. A single histogram match performed prior to registration alleviated some of these effects but was also prone to image distortion and was quantifiably less robust and accurate than the iterative approach. Within the six case registration accuracy study, iterative intensity matching Demons reduced mean TRE to (2.5 +/- 2.8) mm compared to (3.5 +/- 3.0) mm with rigid registration. CONCLUSIONS A method was developed to iteratively correct CT-CBCT intensity disparity during Demons registration, enabling fast, intensity-based registration in CBCT-guided procedures such as surgery and radiotherapy, in which CBCT voxel values may be inaccurate. Accurate CT-CBCT registration in turn facilitates registration of multimodality preoperative image and planning data to intraoperative CBCT by way of the preoperative CT, thereby linking the intraoperative frame of reference to a wealth of preoperative information that could improve interventional guidance.},
keywords = {CBCT, Image Registration, Multimodality},
pubstate = {published},
tppubtype = {article}
}
Nithiananthan, Sajendra; Mirota, Daniel J.; Uneri, Ali; Schafer, Sebastian; Otake, Yoshito; Stayman, J. Webster; Siewerdsen, Jeffrey H.
Incorporating tissue excision in deformable image registration: a modified demons algorithm for cone-beam CT-guided surgery Proceedings Article
In: Wong, Kenneth H.; III, David R. Holmes (Ed.): SPIE Medical Imaging, pp. 796404, International Society for Optics and Photonics 2011.
Links | BibTeX | Tags: CBCT, Image Guided Surgery, Image Registration
@inproceedings{nithiananthan2011incorporating,
title = {Incorporating tissue excision in deformable image registration: a modified demons algorithm for cone-beam CT-guided surgery},
author = {Sajendra Nithiananthan and Daniel J. Mirota and Ali Uneri and Sebastian Schafer and Yoshito Otake and J. Webster Stayman and Jeffrey H. Siewerdsen },
editor = {Kenneth H. Wong and David R. Holmes III },
url = {http://proceedings.spiedigitallibrary.org/proceeding.aspx?doi=10.1117/12.878258},
doi = {10.1117/12.878258},
year = {2011},
date = {2011-03-01},
booktitle = {SPIE Medical Imaging},
pages = {796404},
organization = {International Society for Optics and Photonics},
keywords = {CBCT, Image Guided Surgery, Image Registration},
pubstate = {published},
tppubtype = {inproceedings}
}
Uneri, Ali; Schafer, Sebastian; Mirota, Daniel J.; Nithiananthan, Sajendra; Otake, Yoshito; Reaungamornrat, Sureerat; Yoo, Jongheun; Stayman, J. Webster; Reh, Douglas D.; Gallia, Gary L.; Khanna, A. Jay; Hager, Gregory; Taylor, Russell H.; Kleinszig, Gerhard; Siewerdsen, Jeffrey H.
Architecture of a high-performance surgical guidance system based on C-arm cone-beam CT: software platform for technical integration and clinical translation Proceedings Article
In: Wong, Kenneth H.; III, David R. Holmes (Ed.): SPIE Medical Imaging, pp. 796422, International Society for Optics and Photonics 2011.
Links | BibTeX | Tags: CBCT, Image Guided Surgery
@inproceedings{uneri2011architecture,
title = {Architecture of a high-performance surgical guidance system based on C-arm cone-beam CT: software platform for technical integration and clinical translation},
author = {Ali Uneri and Sebastian Schafer and Daniel J. Mirota and Sajendra Nithiananthan and Yoshito Otake and Sureerat Reaungamornrat and Jongheun Yoo and J. Webster Stayman and Douglas D. Reh and Gary L. Gallia and A. Jay Khanna and Gregory Hager and Russell H. Taylor and Gerhard Kleinszig and Jeffrey H. Siewerdsen },
editor = {Kenneth H. Wong and David R. Holmes III},
url = {http://proceedings.spiedigitallibrary.org/proceeding.aspx?doi=10.1117/12.878191},
doi = {10.1117/12.878191},
year = {2011},
date = {2011-03-01},
booktitle = {SPIE Medical Imaging},
pages = {796422},
organization = {International Society for Optics and Photonics},
keywords = {CBCT, Image Guided Surgery},
pubstate = {published},
tppubtype = {inproceedings}
}
Zbijewski, Wojciech; Jean, Paul De; Prakash, Prakhar; Ding, Yifu; Stayman, J. Webster; Packard, Nathan; Senn, Robert; Yang, Dong; Yorkston, John; Machado, Antonio; Carrino, John A.; Siewerdsen, Jeffrey H.
Design and optimization of a dedicated cone-beam CT system for musculoskeletal extremities imaging Proceedings Article
In: Pelc, Norbert J.; Samei, Ehsan; Nishikawa, Robert M. (Ed.): SPIE Medical Imaging, pp. 796104, International Society for Optics and Photonics 2011.
Links | BibTeX | Tags: Analysis, CBCT, Extremities, System Assessment, System Design
@inproceedings{zbijewski2011design,
title = {Design and optimization of a dedicated cone-beam CT system for musculoskeletal extremities imaging},
author = {Wojciech Zbijewski and Paul De Jean and Prakhar Prakash and Yifu Ding and J. Webster Stayman and Nathan Packard and Robert Senn and Dong Yang and John Yorkston and Antonio Machado and John A. Carrino and Jeffrey H. Siewerdsen },
editor = {Norbert J. Pelc and Ehsan Samei and Robert M. Nishikawa},
url = {http://proceedings.spiedigitallibrary.org/proceeding.aspx?doi=10.1117/12.878077},
doi = {10.1117/12.878077},
year = {2011},
date = {2011-03-01},
booktitle = {SPIE Medical Imaging},
pages = {796104},
organization = {International Society for Optics and Photonics},
keywords = {Analysis, CBCT, Extremities, System Assessment, System Design},
pubstate = {published},
tppubtype = {inproceedings}
}
Lee, Stella; Gallia, Gary L.; Reh, Douglas D.; Schafer, Sebastian; Uneri, Ali; Mirota, Daniel J.; Nithiananthan, Sajendra; Otake, Yoshito; Stayman, J. Webster; Zbijewski, Wojciech; Siewerdsen, Jeffrey H.
In: Skull Base, vol. 21, no. S 01, pp. A030, 2011, ISSN: 1531-5010.
Links | BibTeX | Tags: CBCT, Head/Neck, Image Guided Surgery, System Assessment
@article{lee2011cone,
title = {Cone Beam CT-Assisted Endoscopic Sinus and Skull Base Surgery: Quantitative Analysis of Surgical Performance Using a Next-Generation C-Arm Prototype},
author = {Stella Lee and Gary L. Gallia and Douglas D. Reh and Sebastian Schafer and Ali Uneri and Daniel J. Mirota and Sajendra Nithiananthan and Yoshito Otake and J. Webster Stayman and Wojciech Zbijewski and Jeffrey H. Siewerdsen},
url = {http://www.thieme-connect.de/DOI/DOI?10.1055/s-2011-1274205},
doi = {10.1055/s-2011-1274205},
issn = {1531-5010},
year = {2011},
date = {2011-01-01},
journal = {Skull Base},
volume = {21},
number = {S 01},
pages = {A030},
keywords = {CBCT, Head/Neck, Image Guided Surgery, System Assessment},
pubstate = {published},
tppubtype = {article}
}
Reaungamornrat, Sureerat; Otake, Yoshito; Uneri, Ali; Schafer, Sebastian; Stayman, J. Webster; Zbijewski, Wojciech; Mirota, Daniel J.; Yoo, Jongheun; Nithiananthan, Sajendra; Khanna, A. Jay; Taylor, Russell H.; Siewerdsen, Jeffrey H.
Tracker-on-C: A novel tracker configuration for image-guided therapy using a mobile C-arm Journal Article
In: Computer Assisted Radiology and Surgery, Berlin, Germany, pp. 22–25, 2011.
BibTeX | Tags: CBCT, Image Guided Surgery
@article{reaungamornrat2011tracker,
title = {Tracker-on-C: A novel tracker configuration for image-guided therapy using a mobile C-arm},
author = {Sureerat Reaungamornrat and Yoshito Otake and Ali Uneri and Sebastian Schafer and J. Webster Stayman and Wojciech Zbijewski and Daniel J. Mirota and Jongheun Yoo and Sajendra Nithiananthan and A. Jay Khanna and Russell H. Taylor and Jeffrey H. Siewerdsen },
year = {2011},
date = {2011-01-01},
journal = {Computer Assisted Radiology and Surgery, Berlin, Germany},
pages = {22--25},
keywords = {CBCT, Image Guided Surgery},
pubstate = {published},
tppubtype = {article}
}
2010
Gang, Grace; Lee, Junghoon; Stayman, J. Webster; Tward, Daniel J.; Zbijewski, Wojciech; Prince, Jerry L.; Siewerdsen, Jeffrey H.
The generalized NEQ and detectability index for tomosynthesis and cone-beam CT: from cascaded systems analysis to human observers Proceedings Article
In: Samei, Ehsan; Pelc, Norbert J. (Ed.): SPIE Medical Imaging, pp. 76220Y, International Society for Optics and Photonics 2010.
Links | BibTeX | Tags: Analysis, CBCT, Task-Driven Imaging
@inproceedings{gang2010generalized,
title = {The generalized NEQ and detectability index for tomosynthesis and cone-beam CT: from cascaded systems analysis to human observers},
author = {Grace Gang and Junghoon Lee and J. Webster Stayman and Daniel J. Tward and Wojciech Zbijewski and Jerry L. Prince and Jeffrey H. Siewerdsen },
editor = {Ehsan Samei and Norbert J. Pelc},
url = {http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3845534/},
doi = {10.1117/12.845462},
year = {2010},
date = {2010-03-01},
booktitle = {SPIE Medical Imaging},
pages = {76220Y},
organization = {International Society for Optics and Photonics},
keywords = {Analysis, CBCT, Task-Driven Imaging},
pubstate = {published},
tppubtype = {inproceedings}
}
2009
Zbijewski, Wojciech; Stayman, J. Webster
Volumetric soft tissue brain imaging on xCAT, a mobile flat-panel x-ray CT system Proceedings Article
In: Samei, Ehsan; Hsieh, Jiang (Ed.): SPIE Medical Imaging, pp. 72582K, 2009.
Links | BibTeX | Tags: CBCT, Head/Neck, System Assessment, System Design
@inproceedings{zbijewski2009volumetric,
title = {Volumetric soft tissue brain imaging on xCAT, a mobile flat-panel x-ray CT system},
author = {Wojciech Zbijewski and J. Webster Stayman },
editor = {Ehsan Samei and Jiang Hsieh},
url = {http://proceedings.spiedigitallibrary.org/proceeding.aspx?doi=10.1117/12.811025},
doi = {10.1117/12.811025},
year = {2009},
date = {2009-02-01},
booktitle = {SPIE Medical Imaging},
volume = {7258},
pages = {72582K},
keywords = {CBCT, Head/Neck, System Assessment, System Design},
pubstate = {published},
tppubtype = {inproceedings}
}
2008
Naik, Vipul; Stayman, J. Webster
Interactive intraoperative imaging and guidance with a pre-registered CT volume Proceedings Article
In: 2008 IEEE Nuclear Science Symposium Conference Record, pp. 3886–3888, IEEE, 2008, ISBN: 978-1-4244-2714-7.
Abstract | Links | BibTeX | Tags: CBCT, Image Guided Surgery
@inproceedings{Naik2008,
title = {Interactive intraoperative imaging and guidance with a pre-registered CT volume},
author = {Vipul Naik and J. Webster Stayman },
url = {http://ieeexplore.ieee.org/lpdocs/epic03/wrapper.htm?arnumber=4774131},
doi = {10.1109/NSSMIC.2008.4774131},
isbn = {978-1-4244-2714-7},
year = {2008},
date = {2008-10-01},
booktitle = {2008 IEEE Nuclear Science Symposium Conference Record},
pages = {3886--3888},
publisher = {IEEE},
abstract = {An inter-operative image-guided surgery system is described in which the CT volume is pre-registered to the physical scanner, allowing easier workflow and small field-of-view update scans.},
keywords = {CBCT, Image Guided Surgery},
pubstate = {published},
tppubtype = {inproceedings}
}
Jacobson, Matthew W.; Stayman, J. Webster
Compensating for head motion in slowly-rotating cone beam CT systems with optimization transfer based motion estimation Proceedings Article
In: 2008 IEEE Nuclear Science Symposium Conference Record, pp. 5240–5245, IEEE, 2008, ISSN: 1082-3654.
Abstract | Links | BibTeX | Tags: Artifact Correction, CBCT, Motion Compensation
@inproceedings{Jacobson2008,
title = {Compensating for head motion in slowly-rotating cone beam CT systems with optimization transfer based motion estimation},
author = {Matthew W. Jacobson and J. Webster Stayman },
url = {http://ieeexplore.ieee.org/lpdocs/epic03/wrapper.htm?arnumber=4774416},
doi = {10.1109/NSSMIC.2008.4774416},
issn = {1082-3654},
year = {2008},
date = {2008-10-01},
booktitle = {2008 IEEE Nuclear Science Symposium Conference Record},
pages = {5240--5245},
publisher = {IEEE},
abstract = {We present an algorithm that estimates the changing pose of a rigidly moving subject, based on tomographic projections of fiducial markers. The pose estimates can then be used as input data to motion-compensated image reconstruction methods. The proposed algorithm is in the family of so-called optimization transfer algorithms, which have been applied more frequently to tomographic image reconstruction (e.g., the ML-EM algorithm for PET). The algorithm is particularly relevant to the class of slowly-rotating, point-of-care cone beam CT systems, which have recently become prominent in otolaryngological and dental clinics for head and neck scanning. These systems are more compact and inexpensive than traditional CT systems, but because of their slower gantry rotation, are more susceptible to patient head motion over the course of the scan. A virtue of our algorithm is that it does not require a priori knowledge of the marker geometry. The relative positions of the markers are co-estimated together with their 6 degree of freedom position/orientation in each projection view. This means that the marker configuration can be deformably adjusted to fit different patients, giving considerably more flexibility in the design of the marker-to-head attachment gear than with conventional fiducial-based approaches. Our algorithm is also both fast and accurate. In a highly sub-optimal MATLAB implementation, we typically achieve motion estimates yielding sub-millimeter positioning error in 15–30 seconds. We also present motion-compensated reconstructions from real CT acquisitions as evidence of motion-estimation performance.},
keywords = {Artifact Correction, CBCT, Motion Compensation},
pubstate = {published},
tppubtype = {inproceedings}
}
2007
Stayman, J. Webster
Maximum likelihood resolution recovery in X-ray CT with an extended focal spot Proceedings Article
In: 2007 IEEE Nuclear Science Symposium Conference Record, pp. 2644–2645, IEEE, 2007, ISBN: 978-1-4244-0922-8.
Abstract | Links | BibTeX | Tags: CBCT, High-Fidelity Modeling, High-Resolution CT, MBIR
@inproceedings{Stayman2007,
title = {Maximum likelihood resolution recovery in X-ray CT with an extended focal spot},
author = {J. Webster Stayman },
url = {http://ieeexplore.ieee.org/lpdocs/epic03/wrapper.htm?arnumber=4436690},
doi = {10.1109/NSSMIC.2007.4436690},
isbn = {978-1-4244-0922-8},
year = {2007},
date = {2007-01-01},
booktitle = {2007 IEEE Nuclear Science Symposium Conference Record},
volume = {4},
pages = {2644--2645},
publisher = {IEEE},
abstract = {This paper presents a method for recovering resolution in X-ray computed tomographic (CT) systems where the projection of an extended focal spot onto the detector results in significant blur. This system blur is shift-variant and depends on the exact geometry of the CT system and the shape of the focal spot. The responses for the likelihood-based reconstructions show improved resolution over traditional FBP; however, the resolution properties are space-variant and anisotropic in both cases.},
keywords = {CBCT, High-Fidelity Modeling, High-Resolution CT, MBIR},
pubstate = {published},
tppubtype = {inproceedings}
}
Zbijewski, Wojciech; Stayman, J. Webster
xCAT: A mobile, flat-panel volumetric X-ray CT for head and neck imaging Proceedings Article
In: 2007 IEEE Nuclear Science Symposium Conference Record, pp. 2985–2986, IEEE, 2007, ISBN: 978-1-4244-0922-8.
Abstract | Links | BibTeX | Tags: CBCT, Head/Neck, System Assessment, System Design
@inproceedings{Zbijewski2007,
title = {xCAT: A mobile, flat-panel volumetric X-ray CT for head and neck imaging},
author = {Wojciech Zbijewski and J. Webster Stayman },
url = {http://ieeexplore.ieee.org/lpdocs/epic03/wrapper.htm?arnumber=4436761},
doi = {10.1109/NSSMIC.2007.4436761},
isbn = {978-1-4244-0922-8},
year = {2007},
date = {2007-01-01},
booktitle = {2007 IEEE Nuclear Science Symposium Conference Record},
volume = {4},
pages = {2985--2986},
publisher = {IEEE},
abstract = {This paper discusses the design and imaging capabilities of xCAT, a mobile CT scanner aimed specifically at assisting surgical procedures of head and neck and for use in intensive care units. A high degree of compactness and portability has been achieved by utilizing large area flat-panel detectors, cone-beam imaging geometry and by careful mechanical and electrical design of the scanner. The system is powered up from standard electrical wall outlet, but can also be operated from a battery backup power source if needed. Furthermore, the scanner uses a flat-panel receptor capable of acquisition in the so called dual-gain mode [1], which significantly extends the effective dynamic range of the detector. As a result, improvements in the soft-tissue imaging capabilities over most of the currently available flat-panel detector cone-beam CT scanners have been achieved. This paper will discuss the design, data processing chain, patient's dose and image quality metrics for this system. The first soft- tissue brain images of a living human subject obtained with this unit will also be presented.},
keywords = {CBCT, Head/Neck, System Assessment, System Design},
pubstate = {published},
tppubtype = {inproceedings}
}